Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN1P54253 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATXN1P54253 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.99■□□□□ 0.95
ATXN1P54253 SNORA78-201ENST00000459373 127 ntBASIC20.99■□□□□ 0.95
ATXN1P54253 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.99■□□□□ 0.95
ATXN1P54253 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ATXN1P54253 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ATXN1P54253 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ATXN1P54253 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ATXN1P54253 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN1P54253 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ATXN1P54253 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.98■□□□□ 0.95
ATXN1P54253 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 AC099778.1-201ENST00000568593 1911 ntBASIC20.98■□□□□ 0.95
ATXN1P54253 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ATXN1P54253 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.98■□□□□ 0.95
ATXN1P54253 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.98■□□□□ 0.95
ATXN1P54253 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.98■□□□□ 0.95
ATXN1P54253 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.98■□□□□ 0.95
ATXN1P54253 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN1P54253 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATXN1P54253 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.97■□□□□ 0.95
ATXN1P54253 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATXN1P54253 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATXN1P54253 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATXN1P54253 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.97■□□□□ 0.95
ATXN1P54253 Z99916.2-201ENST00000604037 246 ntBASIC20.97■□□□□ 0.95
ATXN1P54253 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATXN1P54253 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATXN1P54253 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATXN1P54253 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ATXN1P54253 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.97■□□□□ 0.95
ATXN1P54253 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATXN1P54253 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.96■□□□□ 0.95
ATXN1P54253 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.96■□□□□ 0.95
ATXN1P54253 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.96■□□□□ 0.95
ATXN1P54253 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ATXN1P54253 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ATXN1P54253 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATXN1P54253 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.96■□□□□ 0.95
ATXN1P54253 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ATXN1P54253 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.96■□□□□ 0.95
ATXN1P54253 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.96■□□□□ 0.95
ATXN1P54253 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.96■□□□□ 0.95
ATXN1P54253 FAM197Y4-202ENST00000622692 608 ntBASIC20.96■□□□□ 0.95
ATXN1P54253 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATXN1P54253 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.96■□□□□ 0.95
ATXN1P54253 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
ATXN1P54253 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.96■□□□□ 0.95
ATXN1P54253 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.95■□□□□ 0.94
ATXN1P54253 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.95■□□□□ 0.94
ATXN1P54253 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.95■□□□□ 0.94
ATXN1P54253 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.95■□□□□ 0.94
ATXN1P54253 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.95■□□□□ 0.94
ATXN1P54253 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.95■□□□□ 0.94
ATXN1P54253 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.95■□□□□ 0.94
ATXN1P54253 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
ATXN1P54253 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATXN1P54253 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ATXN1P54253 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ATXN1P54253 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.94■□□□□ 0.94
ATXN1P54253 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ATXN1P54253 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.94■□□□□ 0.94
ATXN1P54253 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.94■□□□□ 0.94
ATXN1P54253 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms