Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 UBR2YLR024C 5619 nt2.41□□□□□ -2.02
RTF1P53064 NOP9YJL010C 2001 nt2.41□□□□□ -2.02
RTF1P53064 NEO1YIL048W 3456 nt2.41□□□□□ -2.02
RTF1P53064 RPL26BYGR034W 384 nt2.41□□□□□ -2.02
RTF1P53064 YMR272W-BYMR272W-B 108 nt2.41□□□□□ -2.02
RTF1P53064 snR64snR64 101 nt2.4□□□□□ -2.03
RTF1P53064 EMC5YIL027C 426 nt2.4□□□□□ -2.03
RTF1P53064 YHR214C-BYHR214C-B 5382 nt2.39□□□□□ -2.03
RTF1P53064 YLR286W-AYLR286W-A 135 nt2.39□□□□□ -2.03
RTF1P53064 snR14snR14 160 nt2.39□□□□□ -2.03
RTF1P53064 ASE1YOR058C 2658 nt2.38□□□□□ -2.03
RTF1P53064 MYO4YAL029C 4416 nt2.38□□□□□ -2.03
RTF1P53064 RAD9YDR217C 3930 nt2.37□□□□□ -2.03
RTF1P53064 SEC10YLR166C 2616 nt2.37□□□□□ -2.03
RTF1P53064 WAR1YML076C 2835 nt2.37□□□□□ -2.03
RTF1P53064 TDA9YML081W 3756 nt2.36□□□□□ -2.03
RTF1P53064 YMR045CYMR045C 5268 nt2.36□□□□□ -2.03
RTF1P53064 AZF1YOR113W 2745 nt2.35□□□□□ -2.03
RTF1P53064 USO1YDL058W 5373 nt2.34□□□□□ -2.04
RTF1P53064 SMC4YLR086W 4257 nt2.33□□□□□ -2.04
RTF1P53064 RPM2YML091C 3609 nt2.33□□□□□ -2.04
RTF1P53064 YBR200W-AYBR200W-A 165 nt2.33□□□□□ -2.04
RTF1P53064 YDL073WYDL073W 2955 nt2.33□□□□□ -2.04
RTF1P53064 PIK1YNL267W 3201 nt2.32□□□□□ -2.04
RTF1P53064 snR50snR50 90 nt2.31□□□□□ -2.04
RTF1P53064 UBP2YOR124C 3819 nt2.31□□□□□ -2.04
RTF1P53064 ATG9YDL149W 2994 nt2.3□□□□□ -2.04
RTF1P53064 IRC20YLR247C 4671 nt2.29□□□□□ -2.04
RTF1P53064 STO1YMR125W 2586 nt2.29□□□□□ -2.04
RTF1P53064 CHS1YNL192W 3396 nt2.29□□□□□ -2.04
RTF1P53064 NUP192YJL039C 5052 nt2.29□□□□□ -2.04
RTF1P53064 YOR093CYOR093C 4947 nt2.28□□□□□ -2.04
RTF1P53064 GEA2YEL022W 4380 nt2.28□□□□□ -2.04
RTF1P53064 MGA2YIR033W 3342 nt2.28□□□□□ -2.04
RTF1P53064 NNF2YGR089W 2811 nt2.27□□□□□ -2.05
RTF1P53064 UBP3YER151C 2739 nt2.27□□□□□ -2.05
RTF1P53064 KAP122YGL016W 3246 nt2.27□□□□□ -2.05
RTF1P53064 CFT1YDR301W 4074 nt2.26□□□□□ -2.05
RTF1P53064 YBR109W-AYBR109W-A 225 nt2.22□□□□□ -2.05
RTF1P53064 DNF3YMR162C 4971 nt2.22□□□□□ -2.05
RTF1P53064 BEM3YPL115C 3387 nt2.21□□□□□ -2.06
RTF1P53064 ROM2YLR371W 4071 nt2.2□□□□□ -2.06
RTF1P53064 YLR422WYLR422W 5799 nt2.2□□□□□ -2.06
RTF1P53064 SKI3YPR189W 4299 nt2.19□□□□□ -2.06
RTF1P53064 tD(GUC)QtD(GUC)Q 75 nt2.17□□□□□ -2.06
RTF1P53064 KCS1YDR017C 3153 nt2.16□□□□□ -2.06
RTF1P53064 YKL225WYKL225W 348 nt2.16□□□□□ -2.06
RTF1P53064 TMA7YLR262C-A 195 nt2.16□□□□□ -2.06
RTF1P53064 PRP16YKR086W 3216 nt2.15□□□□□ -2.06
RTF1P53064 MON2YNL297C 4911 nt2.15□□□□□ -2.07
RTF1P53064 SAC3YDR159W 3906 nt2.14□□□□□ -2.07
RTF1P53064 tN(GUU)QtN(GUU)Q 71 nt2.14□□□□□ -2.07
RTF1P53064 YLR299C-AYLR299C-A 93 nt2.13□□□□□ -2.07
RTF1P53064 YCS4YLR272C 3531 nt2.12□□□□□ -2.07
RTF1P53064 SEC8YPR055W 3198 nt2.12□□□□□ -2.07
RTF1P53064 APL3YBL037W 3078 nt2.11□□□□□ -2.07
RTF1P53064 PKH3YDR466W 2697 nt2.11□□□□□ -2.07
RTF1P53064 YPR160W-AYPR160W-A 81 nt2.11□□□□□ -2.07
RTF1P53064 CAT8YMR280C 4302 nt2.1□□□□□ -2.07
RTF1P53064 BRR2YER172C 6492 nt2.1□□□□□ -2.07
RTF1P53064 SEC3YER008C 4011 nt2.09□□□□□ -2.07
RTF1P53064 MEC1YBR136W 7107 nt2.09□□□□□ -2.07
RTF1P53064 EST1YLR233C 2100 nt2.08□□□□□ -2.08
RTF1P53064 PMD1YER132C 5262 nt2.08□□□□□ -2.08
RTF1P53064 YDL159C-BYDL159C-B 177 nt2.05□□□□□ -2.08
RTF1P53064 YLR399W-AYLR399W-A 105 nt2.04□□□□□ -2.08
RTF1P53064 SWI4YER111C 3282 nt2.04□□□□□ -2.08
RTF1P53064 TRM732YMR259C 4263 nt2.03□□□□□ -2.08
RTF1P53064 YSP1YHR155W 3687 nt2.03□□□□□ -2.09
RTF1P53064 MSH3YCR092C 3057 nt2.02□□□□□ -2.09
RTF1P53064 snR69snR69 101 nt2.02□□□□□ -2.09
RTF1P53064 ULP2YIL031W 3105 nt2.02□□□□□ -2.09
RTF1P53064 PET127YOR017W 2403 nt2.02□□□□□ -2.09
RTF1P53064 YLR149C-AYLR149C-A 87 nt2.01□□□□□ -2.09
RTF1P53064 FIG2YCR089W 4830 nt2□□□□□ -2.09
RTF1P53064 YER078W-AYER078W-A 165 nt2□□□□□ -2.09
RTF1P53064 YKL096C-BYKL096C-B 150 nt1.99□□□□□ -2.09
RTF1P53064 SXM1YDR395W 2835 nt1.99□□□□□ -2.09
RTF1P53064 CDC25YLR310C 4770 nt1.98□□□□□ -2.09
RTF1P53064 CSE1YGL238W 2883 nt1.97□□□□□ -2.09
RTF1P53064 NUP188YML103C 4968 nt1.97□□□□□ -2.09
RTF1P53064 YHR180C-BYHR180C-B 105 nt1.97□□□□□ -2.09
RTF1P53064 NUP145YGL092W 3954 nt1.96□□□□□ -2.1
RTF1P53064 RPL41AYDL184C 78 nt1.96□□□□□ -2.1
RTF1P53064 YML054C-AYML054C-A 159 nt1.96□□□□□ -2.1
RTF1P53064 YDL159W-AYDL159W-A 132 nt1.95□□□□□ -2.1
RTF1P53064 RDS3YPR094W 324 nt1.94□□□□□ -2.1
RTF1P53064 tT(UGU)HtT(UGU)H 72 nt1.93□□□□□ -2.1
RTF1P53064 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
RTF1P53064 snR75snR75 89 nt1.91□□□□□ -2.1
RTF1P53064 snR38snR38 95 nt1.91□□□□□ -2.1
RTF1P53064 HUG1YML058W-A 207 nt1.9□□□□□ -2.11
RTF1P53064 YBR296C-AYBR296C-A 120 nt1.9□□□□□ -2.11
RTF1P53064 MSN5YDR335W 3675 nt1.89□□□□□ -2.11
RTF1P53064 VPS15YBR097W 4365 nt1.88□□□□□ -2.11
RTF1P53064 CDC39YCR093W 6327 nt1.87□□□□□ -2.11
RTF1P53064 BST1YFL025C 3090 nt1.87□□□□□ -2.11
RTF1P53064 AI1Q0050 2505 nt1.87□□□□□ -2.11
RTF1P53064 SKI7YOR076C 2244 nt1.86□□□□□ -2.11
RTF1P53064 YGR130CYGR130C 2451 nt1.85□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms