Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 AIRN-201ENST00000601203 4374 ntBASIC19.59■□□□□ 0.73
GTF2A1P52655 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GTF2A1P52655 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 AC093484.2-201ENST00000580996 2166 ntBASIC19.59■□□□□ 0.73
GTF2A1P52655 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
GTF2A1P52655 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF2A1P52655 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF2A1P52655 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
GTF2A1P52655 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.58■□□□□ 0.73
GTF2A1P52655 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1P52655 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1P52655 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.58■□□□□ 0.72
GTF2A1P52655 DUX4L18-201ENST00000553347 1267 ntBASIC19.58■□□□□ 0.72
GTF2A1P52655 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GTF2A1P52655 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
GTF2A1P52655 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1P52655 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1P52655 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.58■□□□□ 0.72
GTF2A1P52655 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
GTF2A1P52655 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1P52655 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2A1P52655 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2A1P52655 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
GTF2A1P52655 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1P52655 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.58■□□□□ 0.72
GTF2A1P52655 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2A1P52655 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF2A1P52655 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.57■□□□□ 0.72
GTF2A1P52655 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF2A1P52655 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 AP004607.7-201ENST00000527152 1677 ntBASIC19.57■□□□□ 0.72
GTF2A1P52655 AC139795.1-202ENST00000500444 432 ntBASIC19.57■□□□□ 0.72
GTF2A1P52655 AC104564.3-201ENST00000582367 638 ntBASIC19.57■□□□□ 0.72
GTF2A1P52655 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
GTF2A1P52655 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF2A1P52655 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2A1P52655 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GTF2A1P52655 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2A1P52655 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2A1P52655 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2A1P52655 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2A1P52655 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GTF2A1P52655 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF2A1P52655 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2A1P52655 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GTF2A1P52655 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GTF2A1P52655 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
GTF2A1P52655 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GTF2A1P52655 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2A1P52655 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GTF2A1P52655 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 MIR4281-201ENST00000580852 62 ntBASIC19.55■□□□□ 0.72
GTF2A1P52655 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GTF2A1P52655 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms