Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 DNF3YMR162C 4971 nt1.46□□□□□ -2.18
NIT3P49954 snR85snR85 171 nt1.46□□□□□ -2.18
NIT3P49954 YOR329W-AYOR329W-A 210 nt1.45□□□□□ -2.18
NIT3P49954 YOR093CYOR093C 4947 nt1.45□□□□□ -2.18
NIT3P49954 SEC21YNL287W 2808 nt1.44□□□□□ -2.18
NIT3P49954 BRR2YER172C 6492 nt1.43□□□□□ -2.18
NIT3P49954 MEC1YBR136W 7107 nt1.42□□□□□ -2.18
NIT3P49954 RAD9YDR217C 3930 nt1.42□□□□□ -2.18
NIT3P49954 snR39BsnR39B 96 nt1.4□□□□□ -2.19
NIT3P49954 SEC8YPR055W 3198 nt1.4□□□□□ -2.19
NIT3P49954 YIL071W-AYIL071W-A 477 nt1.39□□□□□ -2.19
NIT3P49954 NUP192YJL039C 5052 nt1.38□□□□□ -2.19
NIT3P49954 IRA1YBR140C 9279 nt1.38□□□□□ -2.19
NIT3P49954 OST4YDL232W 111 nt1.38□□□□□ -2.19
NIT3P49954 YLR232WYLR232W 348 nt1.38□□□□□ -2.19
NIT3P49954 FIG2YCR089W 4830 nt1.38□□□□□ -2.19
NIT3P49954 RPM2YML091C 3609 nt1.38□□□□□ -2.19
NIT3P49954 CAT8YMR280C 4302 nt1.37□□□□□ -2.19
NIT3P49954 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
NIT3P49954 YPR160W-AYPR160W-A 81 nt1.37□□□□□ -2.19
NIT3P49954 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
NIT3P49954 QCR9YGR183C 201 nt1.36□□□□□ -2.19
NIT3P49954 YNL067W-BYNL067W-B 141 nt1.36□□□□□ -2.19
NIT3P49954 YHR131W-AYHR131W-A 246 nt1.35□□□□□ -2.19
NIT3P49954 YLR399W-AYLR399W-A 105 nt1.35□□□□□ -2.19
NIT3P49954 COG6YNL041C 2520 nt1.34□□□□□ -2.2
NIT3P49954 YDL073WYDL073W 2955 nt1.33□□□□□ -2.2
NIT3P49954 tN(GUU)QtN(GUU)Q 71 nt1.33□□□□□ -2.2
NIT3P49954 YCR095W-AYCR095W-A 159 nt1.32□□□□□ -2.2
NIT3P49954 ANS1YHR126C 480 nt1.32□□□□□ -2.2
NIT3P49954 YDR544CYDR544C 429 nt1.31□□□□□ -2.2
NIT3P49954 CCH1YGR217W 6120 nt1.31□□□□□ -2.2
NIT3P49954 MSH3YCR092C 3057 nt1.3□□□□□ -2.2
NIT3P49954 YBR099CYBR099C 384 nt1.28□□□□□ -2.2
NIT3P49954 YDR210WYDR210W 228 nt1.27□□□□□ -2.21
NIT3P49954 SOM1YEL059C-A 225 nt1.27□□□□□ -2.21
NIT3P49954 tM(CAU)Q2tM(CAU)Q2 78 nt1.27□□□□□ -2.21
NIT3P49954 SEC1YDR164C 2175 nt1.27□□□□□ -2.21
NIT3P49954 LAA1YJL207C 6045 nt1.24□□□□□ -2.21
NIT3P49954 YSP1YHR155W 3687 nt1.23□□□□□ -2.21
NIT3P49954 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
NIT3P49954 YGR130CYGR130C 2451 nt1.21□□□□□ -2.22
NIT3P49954 STF2YGR008C 255 nt1.2□□□□□ -2.22
NIT3P49954 YGR146C-AYGR146C-A 162 nt1.19□□□□□ -2.22
NIT3P49954 YJL127W-AYJL127W-A 117 nt1.17□□□□□ -2.22
NIT3P49954 NST1YNL091W 3723 nt1.17□□□□□ -2.22
NIT3P49954 YPL060C-AYPL060C-A 3315 nt1.16□□□□□ -2.22
NIT3P49954 PMP2YEL017C-A 132 nt1.16□□□□□ -2.22
NIT3P49954 YNL103W-AYNL103W-A 90 nt1.16□□□□□ -2.22
NIT3P49954 BEM3YPL115C 3387 nt1.16□□□□□ -2.22
NIT3P49954 ULP2YIL031W 3105 nt1.15□□□□□ -2.22
NIT3P49954 RCO1YMR075W 2055 nt1.15□□□□□ -2.23
NIT3P49954 UBP3YER151C 2739 nt1.15□□□□□ -2.23
NIT3P49954 YNL284C-BYNL284C-B 5268 nt1.15□□□□□ -2.23
NIT3P49954 RKR1YMR247C 4689 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)E1tH(GUG)E1 72 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)E2tH(GUG)E2 72 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)G1tH(GUG)G1 72 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)G2tH(GUG)G2 72 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)HtH(GUG)H 72 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)KtH(GUG)K 72 nt1.14□□□□□ -2.23
NIT3P49954 tH(GUG)MtH(GUG)M 72 nt1.14□□□□□ -2.23
NIT3P49954 YPR117WYPR117W 7470 nt1.13□□□□□ -2.23
NIT3P49954 BIR1YJR089W 2865 nt1.12□□□□□ -2.23
NIT3P49954 GLG1YKR058W 1851 nt1.12□□□□□ -2.23
NIT3P49954 NNF2YGR089W 2811 nt1.11□□□□□ -2.23
NIT3P49954 YBR072C-AYBR072C-A 162 nt1.11□□□□□ -2.23
NIT3P49954 IML1YJR138W 4755 nt1.08□□□□□ -2.24
NIT3P49954 snR61snR61 90 nt1.08□□□□□ -2.24
NIT3P49954 TFB5YDR079C-A 219 nt1.08□□□□□ -2.24
NIT3P49954 YBL109WYBL109W 336 nt1.08□□□□□ -2.24
NIT3P49954 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
NIT3P49954 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
NIT3P49954 BUL2YML111W 2763 nt1.05□□□□□ -2.24
NIT3P49954 YDR524C-AYDR524C-A 120 nt1.04□□□□□ -2.24
NIT3P49954 YNL266WYNL266W 420 nt1.03□□□□□ -2.24
NIT3P49954 YLL006W-AYLL006W-A 177 nt1.02□□□□□ -2.25
NIT3P49954 YMR326CYMR326C 309 nt1.01□□□□□ -2.25
NIT3P49954 YBR178WYBR178W 375 nt1.01□□□□□ -2.25
NIT3P49954 SIP4YJL089W 2490 nt1.01□□□□□ -2.25
NIT3P49954 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
NIT3P49954 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
NIT3P49954 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
NIT3P49954 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
NIT3P49954 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
NIT3P49954 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
NIT3P49954 tV(UAC)BtV(UAC)B 74 nt1□□□□□ -2.25
NIT3P49954 tV(UAC)DtV(UAC)D 74 nt1□□□□□ -2.25
NIT3P49954 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
NIT3P49954 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
NIT3P49954 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
NIT3P49954 MYO1YHR023W 5787 nt0.94□□□□□ -2.26
NIT3P49954 YHR217CYHR217C 462 nt0.94□□□□□ -2.26
NIT3P49954 YOR192C-BYOR192C-B 5313 nt0.93□□□□□ -2.26
NIT3P49954 DOP1YDR141C 5097 nt0.93□□□□□ -2.26
NIT3P49954 SBH1YER087C-B 249 nt0.93□□□□□ -2.26
NIT3P49954 YGL041C-BYGL041C-B 183 nt0.93□□□□□ -2.26
NIT3P49954 SEC10YLR166C 2616 nt0.93□□□□□ -2.26
NIT3P49954 BEM2YER155C 6504 nt0.91□□□□□ -2.26
NIT3P49954 LTE1YAL024C 4308 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms