Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CSNK1EP49674 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1EP49674 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CSNK1EP49674 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CSNK1EP49674 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 EP400NL-214ENST00000641289 2402 ntBASIC19.65■□□□□ 0.74
CSNK1EP49674 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1EP49674 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 AC005521.1-201ENST00000393351 872 ntBASIC19.65■□□□□ 0.74
CSNK1EP49674 AL390955.1-201ENST00000428694 934 ntBASIC19.65■□□□□ 0.74
CSNK1EP49674 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.65■□□□□ 0.74
CSNK1EP49674 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1EP49674 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1EP49674 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1EP49674 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.65■□□□□ 0.74
CSNK1EP49674 AL121603.2-201ENST00000557373 2117 ntBASIC19.65■□□□□ 0.74
CSNK1EP49674 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1EP49674 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1EP49674 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 LINC01568-207ENST00000641790 1380 ntBASIC19.65■□□□□ 0.74
CSNK1EP49674 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.65■□□□□ 0.74
CSNK1EP49674 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1EP49674 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CSNK1EP49674 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK1EP49674 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK1EP49674 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.64■□□□□ 0.73
CSNK1EP49674 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.64■□□□□ 0.73
CSNK1EP49674 KSR1P1-201ENST00000446298 240 ntBASIC19.64■□□□□ 0.73
CSNK1EP49674 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CSNK1EP49674 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.64■□□□□ 0.73
CSNK1EP49674 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK1EP49674 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1EP49674 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
CSNK1EP49674 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1EP49674 CYP2D8P-201ENST00000433633 1490 ntBASIC19.63■□□□□ 0.73
CSNK1EP49674 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.63■□□□□ 0.73
CSNK1EP49674 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1EP49674 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1EP49674 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CSNK1EP49674 NIFKP9-201ENST00000419265 221 ntBASIC19.63■□□□□ 0.73
CSNK1EP49674 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CSNK1EP49674 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1EP49674 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1EP49674 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1EP49674 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.63■□□□□ 0.73
CSNK1EP49674 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.63■□□□□ 0.73
CSNK1EP49674 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.63■□□□□ 0.73
CSNK1EP49674 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.63■□□□□ 0.73
CSNK1EP49674 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.63■□□□□ 0.73
CSNK1EP49674 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1EP49674 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1EP49674 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1EP49674 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1EP49674 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1EP49674 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 KRT16P1-201ENST00000399124 1418 ntBASIC19.62■□□□□ 0.73
CSNK1EP49674 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1EP49674 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1EP49674 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.62■□□□□ 0.73
CSNK1EP49674 AC116562.2-201ENST00000507042 360 ntBASIC19.62■□□□□ 0.73
CSNK1EP49674 NAPSB-206ENST00000562112 1266 ntBASIC19.62■□□□□ 0.73
CSNK1EP49674 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1EP49674 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1EP49674 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
CSNK1EP49674 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1EP49674 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1EP49674 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1EP49674 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CSNK1EP49674 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1EP49674 KRT8P17-201ENST00000453110 1448 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms