Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4P48539 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PCP4P48539 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PCP4P48539 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
PCP4P48539 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PCP4P48539 AL118508.1-201ENST00000613502 2345 ntBASIC13.89□□□□□ -0.19
PCP4P48539 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.88□□□□□ -0.19
PCP4P48539 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.88□□□□□ -0.19
PCP4P48539 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
PCP4P48539 AC244015.2-201ENST00000616358 1861 ntBASIC13.88□□□□□ -0.19
PCP4P48539 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PCP4P48539 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCP4P48539 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4P48539 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4P48539 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4P48539 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4P48539 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PCP4P48539 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4P48539 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
PCP4P48539 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCP4P48539 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC13.87□□□□□ -0.19
PCP4P48539 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4P48539 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PCP4P48539 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4P48539 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
PCP4P48539 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.86□□□□□ -0.19
PCP4P48539 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC13.86□□□□□ -0.19
PCP4P48539 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.86□□□□□ -0.19
PCP4P48539 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
PCP4P48539 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.86□□□□□ -0.19
PCP4P48539 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCP4P48539 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
PCP4P48539 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.86□□□□□ -0.19
PCP4P48539 AC067852.2-201ENST00000590513 2313 ntBASIC13.86□□□□□ -0.19
PCP4P48539 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4P48539 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.86□□□□□ -0.19
PCP4P48539 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms