Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NKX2-1P43699 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
NKX2-1P43699 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-1P43699 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-1P43699 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-1P43699 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NKX2-1P43699 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-1P43699 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-1P43699 AC093503.3-201ENST00000624917 2352 ntBASIC16.33■□□□□ 0.2
NKX2-1P43699 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NKX2-1P43699 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NKX2-1P43699 BCL2-203ENST00000589955 5011 ntBASIC16.32■□□□□ 0.2
NKX2-1P43699 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NKX2-1P43699 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-1P43699 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-1P43699 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX2-1P43699 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NKX2-1P43699 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NKX2-1P43699 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX2-1P43699 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NKX2-1P43699 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
NKX2-1P43699 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX2-1P43699 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX2-1P43699 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NKX2-1P43699 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NKX2-1P43699 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-1P43699 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX2-1P43699 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NKX2-1P43699 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.3■□□□□ 0.2
NKX2-1P43699 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NKX2-1P43699 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 KRT16P2-201ENST00000414673 1423 ntBASIC16.3■□□□□ 0.2
NKX2-1P43699 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 AC008406.3-201ENST00000620001 1374 ntBASIC16.3■□□□□ 0.2
NKX2-1P43699 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NKX2-1P43699 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.3■□□□□ 0.2
NKX2-1P43699 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX2-1P43699 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-1P43699 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-1P43699 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms