Protein–RNA interactions for Protein: P40489

XBP1, Transcriptional repressor XBP1, yeastyeast

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XBP1P40489 YML002WYML002W 2214 nt1.4□□□□□ -2.18
XBP1P40489 MSH3YCR092C 3057 nt1.4□□□□□ -2.19
XBP1P40489 KAP122YGL016W 3246 nt1.4□□□□□ -2.19
XBP1P40489 SAC3YDR159W 3906 nt1.4□□□□□ -2.19
XBP1P40489 tM(CAU)Q2tM(CAU)Q2 78 nt1.39□□□□□ -2.19
XBP1P40489 SMC4YLR086W 4257 nt1.38□□□□□ -2.19
XBP1P40489 NOP9YJL010C 2001 nt1.37□□□□□ -2.19
XBP1P40489 YDR210WYDR210W 228 nt1.37□□□□□ -2.19
XBP1P40489 ASE1YOR058C 2658 nt1.37□□□□□ -2.19
XBP1P40489 SEC21YNL287W 2808 nt1.37□□□□□ -2.19
XBP1P40489 SSK2YNR031C 4740 nt1.37□□□□□ -2.19
XBP1P40489 KAP120YPL125W 3099 nt1.36□□□□□ -2.19
XBP1P40489 snR81snR81 201 nt1.36□□□□□ -2.19
XBP1P40489 FYV10YIL097W 1551 nt1.36□□□□□ -2.19
XBP1P40489 MON2YNL297C 4911 nt1.36□□□□□ -2.19
XBP1P40489 TRM732YMR259C 4263 nt1.35□□□□□ -2.19
XBP1P40489 SET3YKR029C 2256 nt1.35□□□□□ -2.19
XBP1P40489 RAD9YDR217C 3930 nt1.34□□□□□ -2.19
XBP1P40489 STO1YMR125W 2586 nt1.34□□□□□ -2.19
XBP1P40489 YLL066W-BYLL066W-B 171 nt1.34□□□□□ -2.19
XBP1P40489 YLR232WYLR232W 348 nt1.34□□□□□ -2.19
XBP1P40489 PIK1YNL267W 3201 nt1.34□□□□□ -2.2
XBP1P40489 SMC1YFL008W 3678 nt1.33□□□□□ -2.2
XBP1P40489 snR190snR190 190 nt1.33□□□□□ -2.2
XBP1P40489 BIR1YJR089W 2865 nt1.33□□□□□ -2.2
XBP1P40489 snR45snR45 172 nt1.32□□□□□ -2.2
XBP1P40489 YJL127W-AYJL127W-A 117 nt1.31□□□□□ -2.2
XBP1P40489 CCH1YGR217W 6120 nt1.31□□□□□ -2.2
XBP1P40489 RPM2YML091C 3609 nt1.3□□□□□ -2.2
XBP1P40489 SEC3YER008C 4011 nt1.3□□□□□ -2.2
XBP1P40489 RPL26BYGR034W 384 nt1.3□□□□□ -2.2
XBP1P40489 YAL037C-AYAL037C-A 93 nt1.3□□□□□ -2.2
XBP1P40489 YDL073WYDL073W 2955 nt1.3□□□□□ -2.2
XBP1P40489 ROM2YLR371W 4071 nt1.3□□□□□ -2.2
XBP1P40489 SEC1YDR164C 2175 nt1.3□□□□□ -2.2
XBP1P40489 SXM1YDR395W 2835 nt1.3□□□□□ -2.2
XBP1P40489 YGR130CYGR130C 2451 nt1.29□□□□□ -2.2
XBP1P40489 WAR1YML076C 2835 nt1.29□□□□□ -2.2
XBP1P40489 YGR146C-AYGR146C-A 162 nt1.29□□□□□ -2.2
XBP1P40489 YNL266WYNL266W 420 nt1.29□□□□□ -2.2
XBP1P40489 YBR072C-AYBR072C-A 162 nt1.29□□□□□ -2.2
XBP1P40489 APL3YBL037W 3078 nt1.29□□□□□ -2.2
XBP1P40489 SWI4YER111C 3282 nt1.28□□□□□ -2.21
XBP1P40489 tQ(UUG)E2tQ(UUG)E2 72 nt1.26□□□□□ -2.21
XBP1P40489 GEA2YEL022W 4380 nt1.25□□□□□ -2.21
XBP1P40489 PET127YOR017W 2403 nt1.24□□□□□ -2.21
XBP1P40489 LAA1YJL207C 6045 nt1.23□□□□□ -2.21
XBP1P40489 CDC25YLR310C 4770 nt1.23□□□□□ -2.21
XBP1P40489 FYV8YGR196C 2454 nt1.23□□□□□ -2.21
XBP1P40489 BST1YFL025C 3090 nt1.22□□□□□ -2.21
XBP1P40489 snR62snR62 100 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
XBP1P40489 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
XBP1P40489 YBR200W-AYBR200W-A 165 nt1.22□□□□□ -2.21
XBP1P40489 NUP188YML103C 4968 nt1.22□□□□□ -2.21
XBP1P40489 IML1YJR138W 4755 nt1.21□□□□□ -2.21
XBP1P40489 CDC39YCR093W 6327 nt1.21□□□□□ -2.22
XBP1P40489 HUG1YML058W-A 207 nt1.21□□□□□ -2.22
XBP1P40489 SPC110YDR356W 2835 nt1.21□□□□□ -2.22
XBP1P40489 NUP145YGL092W 3954 nt1.21□□□□□ -2.22
XBP1P40489 YOL083C-AYOL083C-A 141 nt1.2□□□□□ -2.22
XBP1P40489 SEC8YPR055W 3198 nt1.19□□□□□ -2.22
XBP1P40489 PRP16YKR086W 3216 nt1.19□□□□□ -2.22
XBP1P40489 YBL071C-BYBL071C-B 99 nt1.19□□□□□ -2.22
XBP1P40489 tN(GUU)QtN(GUU)Q 71 nt1.18□□□□□ -2.22
XBP1P40489 AZF1YOR113W 2745 nt1.17□□□□□ -2.22
XBP1P40489 NNF2YGR089W 2811 nt1.17□□□□□ -2.22
XBP1P40489 YPR160W-AYPR160W-A 81 nt1.16□□□□□ -2.22
XBP1P40489 tV(UAC)BtV(UAC)B 74 nt1.15□□□□□ -2.23
XBP1P40489 tV(UAC)DtV(UAC)D 74 nt1.15□□□□□ -2.23
XBP1P40489 YLR399W-AYLR399W-A 105 nt1.15□□□□□ -2.23
XBP1P40489 EST2YLR318W 2655 nt1.15□□□□□ -2.23
XBP1P40489 RPS26AYGL189C 360 nt1.14□□□□□ -2.23
XBP1P40489 YBR196C-AYBR196C-A 150 nt1.14□□□□□ -2.23
XBP1P40489 HKR1YDR420W 5409 nt1.13□□□□□ -2.23
XBP1P40489 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
XBP1P40489 UBP3YER151C 2739 nt1.12□□□□□ -2.23
XBP1P40489 MSN5YDR335W 3675 nt1.12□□□□□ -2.23
XBP1P40489 SEC10YLR166C 2616 nt1.12□□□□□ -2.23
XBP1P40489 BEM3YPL115C 3387 nt1.11□□□□□ -2.23
XBP1P40489 YSP1YHR155W 3687 nt1.11□□□□□ -2.23
XBP1P40489 YPL060C-AYPL060C-A 3315 nt1.11□□□□□ -2.23
XBP1P40489 YOL164W-AYOL164W-A 183 nt1.09□□□□□ -2.23
XBP1P40489 ULP2YIL031W 3105 nt1.09□□□□□ -2.24
XBP1P40489 GLG1YKR058W 1851 nt1.08□□□□□ -2.24
XBP1P40489 CLU1YMR012W 3834 nt1.08□□□□□ -2.24
XBP1P40489 SIP4YJL089W 2490 nt1.07□□□□□ -2.24
XBP1P40489 YDR034C-AYDR034C-A 177 nt1.07□□□□□ -2.24
XBP1P40489 YGR240C-AYGR240C-A 201 nt1.05□□□□□ -2.24
XBP1P40489 YLR286W-AYLR286W-A 135 nt1.05□□□□□ -2.24
XBP1P40489 YBL100W-CYBL100W-C 120 nt1.04□□□□□ -2.24
XBP1P40489 SPT7YBR081C 3999 nt1.01□□□□□ -2.25
XBP1P40489 tD(GUC)QtD(GUC)Q 75 nt1.01□□□□□ -2.25
XBP1P40489 MYO1YHR023W 5787 nt1.01□□□□□ -2.25
XBP1P40489 ORC3YLL004W 1851 nt1□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms