Protein–RNA interactions for Protein: P39715

ECM1, Shuttling pre-60S factor ECM1, yeastyeast

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM1P39715 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
ECM1P39715 YDR544CYDR544C 429 nt1.43□□□□□ -2.18
ECM1P39715 YBR099CYBR099C 384 nt1.43□□□□□ -2.18
ECM1P39715 RPL26BYGR034W 384 nt1.42□□□□□ -2.18
ECM1P39715 EST2YLR318W 2655 nt1.41□□□□□ -2.18
ECM1P39715 OST4YDL232W 111 nt1.41□□□□□ -2.18
ECM1P39715 YLR041WYLR041W 321 nt1.4□□□□□ -2.19
ECM1P39715 PMP2YEL017C-A 132 nt1.39□□□□□ -2.19
ECM1P39715 YHR131W-AYHR131W-A 246 nt1.39□□□□□ -2.19
ECM1P39715 NUP145YGL092W 3954 nt1.38□□□□□ -2.19
ECM1P39715 SOM1YEL059C-A 225 nt1.38□□□□□ -2.19
ECM1P39715 YLR232WYLR232W 348 nt1.38□□□□□ -2.19
ECM1P39715 YLR422WYLR422W 5799 nt1.38□□□□□ -2.19
ECM1P39715 CAT8YMR280C 4302 nt1.38□□□□□ -2.19
ECM1P39715 YCS4YLR272C 3531 nt1.36□□□□□ -2.19
ECM1P39715 YNL103W-AYNL103W-A 90 nt1.36□□□□□ -2.19
ECM1P39715 BRR2YER172C 6492 nt1.36□□□□□ -2.19
ECM1P39715 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
ECM1P39715 tM(CAU)Q2tM(CAU)Q2 78 nt1.35□□□□□ -2.19
ECM1P39715 YBL109WYBL109W 336 nt1.34□□□□□ -2.19
ECM1P39715 FIG2YCR089W 4830 nt1.34□□□□□ -2.2
ECM1P39715 REV3YPL167C 4515 nt1.34□□□□□ -2.2
ECM1P39715 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
ECM1P39715 SEC3YER008C 4011 nt1.33□□□□□ -2.2
ECM1P39715 CDC25YLR310C 4770 nt1.33□□□□□ -2.2
ECM1P39715 YDR524C-AYDR524C-A 120 nt1.32□□□□□ -2.2
ECM1P39715 NUP192YJL039C 5052 nt1.32□□□□□ -2.2
ECM1P39715 SCC2YDR180W 4482 nt1.31□□□□□ -2.2
ECM1P39715 TFB5YDR079C-A 219 nt1.31□□□□□ -2.2
ECM1P39715 BEM2YER155C 6504 nt1.31□□□□□ -2.2
ECM1P39715 PRP16YKR086W 3216 nt1.3□□□□□ -2.2
ECM1P39715 MYO1YHR023W 5787 nt1.3□□□□□ -2.2
ECM1P39715 tN(GUU)QtN(GUU)Q 71 nt1.3□□□□□ -2.2
ECM1P39715 YDR210WYDR210W 228 nt1.29□□□□□ -2.2
ECM1P39715 DOP1YDR141C 5097 nt1.28□□□□□ -2.21
ECM1P39715 BUD3YCL014W 4911 nt1.27□□□□□ -2.21
ECM1P39715 LAA1YJL207C 6045 nt1.27□□□□□ -2.21
ECM1P39715 SEC8YPR055W 3198 nt1.26□□□□□ -2.21
ECM1P39715 MSH3YCR092C 3057 nt1.26□□□□□ -2.21
ECM1P39715 YJL127W-AYJL127W-A 117 nt1.25□□□□□ -2.21
ECM1P39715 COG6YNL041C 2520 nt1.25□□□□□ -2.21
ECM1P39715 YPR160W-AYPR160W-A 81 nt1.24□□□□□ -2.21
ECM1P39715 YBR178WYBR178W 375 nt1.24□□□□□ -2.21
ECM1P39715 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
ECM1P39715 SEC1YDR164C 2175 nt1.23□□□□□ -2.21
ECM1P39715 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
ECM1P39715 BEM3YPL115C 3387 nt1.22□□□□□ -2.21
ECM1P39715 YDL073WYDL073W 2955 nt1.22□□□□□ -2.21
ECM1P39715 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
ECM1P39715 RCO1YMR075W 2055 nt1.22□□□□□ -2.21
ECM1P39715 KAP120YPL125W 3099 nt1.21□□□□□ -2.22
ECM1P39715 snR61snR61 90 nt1.21□□□□□ -2.22
ECM1P39715 YLR399W-AYLR399W-A 105 nt1.21□□□□□ -2.22
ECM1P39715 YMR326CYMR326C 309 nt1.2□□□□□ -2.22
ECM1P39715 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
ECM1P39715 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
ECM1P39715 RKR1YMR247C 4689 nt1.17□□□□□ -2.22
ECM1P39715 STF2YGR008C 255 nt1.16□□□□□ -2.22
ECM1P39715 UBP3YER151C 2739 nt1.16□□□□□ -2.22
ECM1P39715 YGR146C-AYGR146C-A 162 nt1.15□□□□□ -2.23
ECM1P39715 tH(GUG)E1tH(GUG)E1 72 nt1.14□□□□□ -2.23
ECM1P39715 tH(GUG)E2tH(GUG)E2 72 nt1.14□□□□□ -2.23
ECM1P39715 tH(GUG)G1tH(GUG)G1 72 nt1.14□□□□□ -2.23
ECM1P39715 tH(GUG)G2tH(GUG)G2 72 nt1.14□□□□□ -2.23
ECM1P39715 tH(GUG)HtH(GUG)H 72 nt1.14□□□□□ -2.23
ECM1P39715 tH(GUG)KtH(GUG)K 72 nt1.14□□□□□ -2.23
ECM1P39715 tH(GUG)MtH(GUG)M 72 nt1.14□□□□□ -2.23
ECM1P39715 YGL041C-BYGL041C-B 183 nt1.14□□□□□ -2.23
ECM1P39715 YBR072C-AYBR072C-A 162 nt1.13□□□□□ -2.23
ECM1P39715 BIR1YJR089W 2865 nt1.13□□□□□ -2.23
ECM1P39715 YHR217CYHR217C 462 nt1.11□□□□□ -2.23
ECM1P39715 NST1YNL091W 3723 nt1.11□□□□□ -2.23
ECM1P39715 YGR130CYGR130C 2451 nt1.1□□□□□ -2.23
ECM1P39715 YNL266WYNL266W 420 nt1.1□□□□□ -2.23
ECM1P39715 YSP1YHR155W 3687 nt1.1□□□□□ -2.23
ECM1P39715 ROM2YLR371W 4071 nt1.08□□□□□ -2.24
ECM1P39715 NNF2YGR089W 2811 nt1.07□□□□□ -2.24
ECM1P39715 GLG1YKR058W 1851 nt1.05□□□□□ -2.24
ECM1P39715 IML1YJR138W 4755 nt1.03□□□□□ -2.24
ECM1P39715 YLL006W-AYLL006W-A 177 nt1.02□□□□□ -2.25
ECM1P39715 YOR192C-BYOR192C-B 5313 nt1.01□□□□□ -2.25
ECM1P39715 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
ECM1P39715 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
ECM1P39715 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
ECM1P39715 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
ECM1P39715 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
ECM1P39715 tV(UAC)BtV(UAC)B 74 nt1.01□□□□□ -2.25
ECM1P39715 tV(UAC)DtV(UAC)D 74 nt1.01□□□□□ -2.25
ECM1P39715 SIP4YJL089W 2490 nt1□□□□□ -2.25
ECM1P39715 ULP2YIL031W 3105 nt1□□□□□ -2.25
ECM1P39715 snR81snR81 201 nt0.99□□□□□ -2.25
ECM1P39715 CSE1YGL238W 2883 nt0.98□□□□□ -2.25
ECM1P39715 SBH1YER087C-B 249 nt0.98□□□□□ -2.25
ECM1P39715 SEC10YLR166C 2616 nt0.96□□□□□ -2.26
ECM1P39715 YPR117WYPR117W 7470 nt0.96□□□□□ -2.26
ECM1P39715 CLU1YMR012W 3834 nt0.96□□□□□ -2.26
ECM1P39715 HUG1YML058W-A 207 nt0.94□□□□□ -2.26
ECM1P39715 YOL083C-AYOL083C-A 141 nt0.94□□□□□ -2.26
ECM1P39715 YBR196C-AYBR196C-A 150 nt0.94□□□□□ -2.26
ECM1P39715 EST1YLR233C 2100 nt0.92□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 95.2 ms