Protein–RNA interactions for Protein: P38764

RPN1, 26S proteasome regulatory subunit RPN1, yeastyeast

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN1P38764 AZF1YOR113W 2745 nt2.24□□□□□ -2.05
RPN1P38764 EST2YLR318W 2655 nt2.24□□□□□ -2.05
RPN1P38764 PMD1YER132C 5262 nt2.23□□□□□ -2.05
RPN1P38764 snR61snR61 90 nt2.23□□□□□ -2.05
RPN1P38764 tM(CAU)Q2tM(CAU)Q2 78 nt2.23□□□□□ -2.05
RPN1P38764 NUP157YER105C 4176 nt2.23□□□□□ -2.05
RPN1P38764 NUP188YML103C 4968 nt2.22□□□□□ -2.05
RPN1P38764 CHS1YNL192W 3396 nt2.22□□□□□ -2.05
RPN1P38764 YHR131W-AYHR131W-A 246 nt2.21□□□□□ -2.06
RPN1P38764 tT(UGU)HtT(UGU)H 72 nt2.21□□□□□ -2.06
RPN1P38764 GEA2YEL022W 4380 nt2.21□□□□□ -2.06
RPN1P38764 IRC20YLR247C 4671 nt2.2□□□□□ -2.06
RPN1P38764 CFT1YDR301W 4074 nt2.19□□□□□ -2.06
RPN1P38764 FAB1YFR019W 6837 nt2.19□□□□□ -2.06
RPN1P38764 YMR247W-AYMR247W-A 144 nt2.18□□□□□ -2.06
RPN1P38764 YOR093CYOR093C 4947 nt2.18□□□□□ -2.06
RPN1P38764 MSN5YDR335W 3675 nt2.18□□□□□ -2.06
RPN1P38764 SEC8YPR055W 3198 nt2.16□□□□□ -2.06
RPN1P38764 YHR217CYHR217C 462 nt2.16□□□□□ -2.06
RPN1P38764 YHR214C-BYHR214C-B 5382 nt2.14□□□□□ -2.07
RPN1P38764 KAP120YPL125W 3099 nt2.14□□□□□ -2.07
RPN1P38764 CDC39YCR093W 6327 nt2.12□□□□□ -2.07
RPN1P38764 NUP192YJL039C 5052 nt2.12□□□□□ -2.07
RPN1P38764 PRP16YKR086W 3216 nt2.12□□□□□ -2.07
RPN1P38764 SBH1YER087C-B 249 nt2.1□□□□□ -2.07
RPN1P38764 YLR399W-AYLR399W-A 105 nt2.1□□□□□ -2.07
RPN1P38764 SXM1YDR395W 2835 nt2.1□□□□□ -2.07
RPN1P38764 COG6YNL041C 2520 nt2.09□□□□□ -2.07
RPN1P38764 YDR210WYDR210W 228 nt2.08□□□□□ -2.08
RPN1P38764 VPS15YBR097W 4365 nt2.08□□□□□ -2.08
RPN1P38764 YJL127W-AYJL127W-A 117 nt2.06□□□□□ -2.08
RPN1P38764 YPR160W-AYPR160W-A 81 nt2.04□□□□□ -2.08
RPN1P38764 YGR146C-AYGR146C-A 162 nt2.03□□□□□ -2.08
RPN1P38764 YDL073WYDL073W 2955 nt2.01□□□□□ -2.09
RPN1P38764 DNF3YMR162C 4971 nt2□□□□□ -2.09
RPN1P38764 YGL041C-BYGL041C-B 183 nt1.98□□□□□ -2.09
RPN1P38764 YSP1YHR155W 3687 nt1.97□□□□□ -2.09
RPN1P38764 RCO1YMR075W 2055 nt1.97□□□□□ -2.09
RPN1P38764 SEC1YDR164C 2175 nt1.97□□□□□ -2.09
RPN1P38764 BEM3YPL115C 3387 nt1.96□□□□□ -2.09
RPN1P38764 tN(GUU)QtN(GUU)Q 71 nt1.96□□□□□ -2.1
RPN1P38764 HUG1YML058W-A 207 nt1.96□□□□□ -2.1
RPN1P38764 BIR1YJR089W 2865 nt1.96□□□□□ -2.1
RPN1P38764 YDL247W-AYDL247W-A 75 nt1.94□□□□□ -2.1
RPN1P38764 SPC110YDR356W 2835 nt1.92□□□□□ -2.1
RPN1P38764 IRA1YBR140C 9279 nt1.92□□□□□ -2.1
RPN1P38764 YNL266WYNL266W 420 nt1.89□□□□□ -2.11
RPN1P38764 CAT8YMR280C 4302 nt1.88□□□□□ -2.11
RPN1P38764 BRR2YER172C 6492 nt1.88□□□□□ -2.11
RPN1P38764 ULP2YIL031W 3105 nt1.86□□□□□ -2.11
RPN1P38764 UBP3YER151C 2739 nt1.85□□□□□ -2.11
RPN1P38764 MEC1YBR136W 7107 nt1.84□□□□□ -2.12
RPN1P38764 GLG1YKR058W 1851 nt1.83□□□□□ -2.12
RPN1P38764 YGR130CYGR130C 2451 nt1.81□□□□□ -2.12
RPN1P38764 YBR072C-AYBR072C-A 162 nt1.81□□□□□ -2.12
RPN1P38764 SSK2YNR031C 4740 nt1.81□□□□□ -2.12
RPN1P38764 MSH3YCR092C 3057 nt1.8□□□□□ -2.12
RPN1P38764 NNF2YGR089W 2811 nt1.77□□□□□ -2.13
RPN1P38764 FYV8YGR196C 2454 nt1.76□□□□□ -2.13
RPN1P38764 tQ(UUG)E2tQ(UUG)E2 72 nt1.75□□□□□ -2.13
RPN1P38764 HKR1YDR420W 5409 nt1.75□□□□□ -2.13
RPN1P38764 PET127YOR017W 2403 nt1.74□□□□□ -2.13
RPN1P38764 FIG2YCR089W 4830 nt1.74□□□□□ -2.13
RPN1P38764 LAA1YJL207C 6045 nt1.74□□□□□ -2.13
RPN1P38764 PIK1YNL267W 3201 nt1.73□□□□□ -2.13
RPN1P38764 snR81snR81 201 nt1.73□□□□□ -2.13
RPN1P38764 YAL037C-AYAL037C-A 93 nt1.73□□□□□ -2.13
RPN1P38764 SPT7YBR081C 3999 nt1.73□□□□□ -2.13
RPN1P38764 CCH1YGR217W 6120 nt1.69□□□□□ -2.14
RPN1P38764 tH(GUG)E1tH(GUG)E1 72 nt1.68□□□□□ -2.14
RPN1P38764 tH(GUG)E2tH(GUG)E2 72 nt1.68□□□□□ -2.14
RPN1P38764 tH(GUG)G1tH(GUG)G1 72 nt1.68□□□□□ -2.14
RPN1P38764 tH(GUG)G2tH(GUG)G2 72 nt1.68□□□□□ -2.14
RPN1P38764 tH(GUG)HtH(GUG)H 72 nt1.68□□□□□ -2.14
RPN1P38764 tH(GUG)KtH(GUG)K 72 nt1.68□□□□□ -2.14
RPN1P38764 tH(GUG)MtH(GUG)M 72 nt1.68□□□□□ -2.14
RPN1P38764 tS(GCU)Q1tS(GCU)Q1 86 nt1.67□□□□□ -2.14
RPN1P38764 YBR196C-AYBR196C-A 150 nt1.67□□□□□ -2.14
RPN1P38764 SEC10YLR166C 2616 nt1.65□□□□□ -2.15
RPN1P38764 YPL060C-AYPL060C-A 3315 nt1.65□□□□□ -2.15
RPN1P38764 YLL006W-AYLL006W-A 177 nt1.61□□□□□ -2.15
RPN1P38764 IML1YJR138W 4755 nt1.6□□□□□ -2.15
RPN1P38764 NST1YNL091W 3723 nt1.6□□□□□ -2.15
RPN1P38764 SCC2YDR180W 4482 nt1.58□□□□□ -2.16
RPN1P38764 YOL083C-AYOL083C-A 141 nt1.55□□□□□ -2.16
RPN1P38764 PAU12YGR294W 363 nt1.54□□□□□ -2.16
RPN1P38764 PAU24YBR301W 363 nt1.54□□□□□ -2.16
RPN1P38764 YPR117WYPR117W 7470 nt1.53□□□□□ -2.16
RPN1P38764 YIL142C-AYIL142C-A 333 nt1.53□□□□□ -2.16
RPN1P38764 tV(UAC)BtV(UAC)B 74 nt1.51□□□□□ -2.17
RPN1P38764 tV(UAC)DtV(UAC)D 74 nt1.51□□□□□ -2.17
RPN1P38764 RKR1YMR247C 4689 nt1.51□□□□□ -2.17
RPN1P38764 YNL284C-BYNL284C-B 5268 nt1.51□□□□□ -2.17
RPN1P38764 CSE1YGL238W 2883 nt1.5□□□□□ -2.17
RPN1P38764 LTE1YAL024C 4308 nt1.49□□□□□ -2.17
RPN1P38764 BUL2YML111W 2763 nt1.49□□□□□ -2.17
RPN1P38764 YBL071C-BYBL071C-B 99 nt1.49□□□□□ -2.17
RPN1P38764 snR69snR69 101 nt1.48□□□□□ -2.17
RPN1P38764 RPS26AYGL189C 360 nt1.48□□□□□ -2.17
RPN1P38764 tD(GUC)QtD(GUC)Q 75 nt1.47□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms