Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SNCAP37840 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SNCAP37840 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.4■□□□□ 0.22
SNCAP37840 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
SNCAP37840 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SNCAP37840 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SNCAP37840 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.4■□□□□ 0.22
SNCAP37840 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.4■□□□□ 0.22
SNCAP37840 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 AC120498.10-201ENST00000621827 505 ntBASIC16.4■□□□□ 0.22
SNCAP37840 AL136967.2-201ENST00000623968 743 ntBASIC16.4■□□□□ 0.22
SNCAP37840 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.4■□□□□ 0.22
SNCAP37840 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.4■□□□□ 0.22
SNCAP37840 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.4■□□□□ 0.22
SNCAP37840 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.4■□□□□ 0.22
SNCAP37840 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNCAP37840 AC005332.7-201ENST00000614046 2005 ntBASIC16.4■□□□□ 0.22
SNCAP37840 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.39■□□□□ 0.22
SNCAP37840 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SNCAP37840 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.39■□□□□ 0.21
SNCAP37840 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 AC110285.6-201ENST00000617652 491 ntBASIC16.39■□□□□ 0.21
SNCAP37840 AL358852.1-201ENST00000623174 1268 ntBASIC16.39■□□□□ 0.21
SNCAP37840 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 AC093503.3-201ENST00000624917 2352 ntBASIC16.39■□□□□ 0.21
SNCAP37840 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.39■□□□□ 0.21
SNCAP37840 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNCAP37840 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SNCAP37840 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNCAP37840 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.38■□□□□ 0.21
SNCAP37840 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 AC079140.4-201ENST00000507448 529 ntBASIC16.38■□□□□ 0.21
SNCAP37840 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.38■□□□□ 0.21
SNCAP37840 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.38■□□□□ 0.21
SNCAP37840 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNCAP37840 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNCAP37840 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SNCAP37840 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.37■□□□□ 0.21
SNCAP37840 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.37■□□□□ 0.21
SNCAP37840 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SNCAP37840 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNCAP37840 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SNCAP37840 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms