Protein–RNA interactions for Protein: P28791

SEC20, Protein transport protein SEC20, yeastyeast

Predictions only

Length 383 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC20P28791 SPC110YDR356W 2835 nt1.76□□□□□ -2.13
SEC20P28791 LAA1YJL207C 6045 nt1.75□□□□□ -2.13
SEC20P28791 FYV10YIL097W 1551 nt1.74□□□□□ -2.13
SEC20P28791 TAH1YCR060W 336 nt1.72□□□□□ -2.13
SEC20P28791 CHS6YJL099W 2241 nt1.71□□□□□ -2.14
SEC20P28791 SEC21YNL287W 2808 nt1.71□□□□□ -2.14
SEC20P28791 PRP16YKR086W 3216 nt1.69□□□□□ -2.14
SEC20P28791 SEC8YPR055W 3198 nt1.67□□□□□ -2.14
SEC20P28791 YOR329W-AYOR329W-A 210 nt1.65□□□□□ -2.15
SEC20P28791 PIK1YNL267W 3201 nt1.64□□□□□ -2.15
SEC20P28791 YCL001W-BYCL001W-B 255 nt1.64□□□□□ -2.15
SEC20P28791 YLR232WYLR232W 348 nt1.63□□□□□ -2.15
SEC20P28791 FYV8YGR196C 2454 nt1.63□□□□□ -2.15
SEC20P28791 CCH1YGR217W 6120 nt1.63□□□□□ -2.15
SEC20P28791 IML1YJR138W 4755 nt1.62□□□□□ -2.15
SEC20P28791 RAD9YDR217C 3930 nt1.62□□□□□ -2.15
SEC20P28791 YGR130CYGR130C 2451 nt1.62□□□□□ -2.15
SEC20P28791 HKR1YDR420W 5409 nt1.61□□□□□ -2.15
SEC20P28791 YLR399W-AYLR399W-A 105 nt1.61□□□□□ -2.15
SEC20P28791 YPR160W-AYPR160W-A 81 nt1.6□□□□□ -2.15
SEC20P28791 YHR131W-AYHR131W-A 246 nt1.59□□□□□ -2.15
SEC20P28791 RPM2YML091C 3609 nt1.59□□□□□ -2.15
SEC20P28791 PET127YOR017W 2403 nt1.59□□□□□ -2.16
SEC20P28791 QCR9YGR183C 201 nt1.57□□□□□ -2.16
SEC20P28791 tQ(UUG)E2tQ(UUG)E2 72 nt1.56□□□□□ -2.16
SEC20P28791 YNL067W-BYNL067W-B 141 nt1.56□□□□□ -2.16
SEC20P28791 snR39BsnR39B 96 nt1.56□□□□□ -2.16
SEC20P28791 snR85snR85 171 nt1.54□□□□□ -2.16
SEC20P28791 OST4YDL232W 111 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)E1tH(GUG)E1 72 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)E2tH(GUG)E2 72 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)G1tH(GUG)G1 72 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)G2tH(GUG)G2 72 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)HtH(GUG)H 72 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)KtH(GUG)K 72 nt1.54□□□□□ -2.16
SEC20P28791 tH(GUG)MtH(GUG)M 72 nt1.54□□□□□ -2.16
SEC20P28791 YNL205CYNL205C 423 nt1.54□□□□□ -2.16
SEC20P28791 tN(GUU)QtN(GUU)Q 71 nt1.53□□□□□ -2.16
SEC20P28791 YDR544CYDR544C 429 nt1.52□□□□□ -2.17
SEC20P28791 YCR095W-AYCR095W-A 159 nt1.51□□□□□ -2.17
SEC20P28791 tM(CAU)Q2tM(CAU)Q2 78 nt1.5□□□□□ -2.17
SEC20P28791 YIL071W-AYIL071W-A 477 nt1.49□□□□□ -2.17
SEC20P28791 tV(UAC)BtV(UAC)B 74 nt1.47□□□□□ -2.17
SEC20P28791 tV(UAC)DtV(UAC)D 74 nt1.47□□□□□ -2.17
SEC20P28791 UBP3YER151C 2739 nt1.46□□□□□ -2.17
SEC20P28791 YSP1YHR155W 3687 nt1.46□□□□□ -2.18
SEC20P28791 COG6YNL041C 2520 nt1.46□□□□□ -2.18
SEC20P28791 SPT7YBR081C 3999 nt1.45□□□□□ -2.18
SEC20P28791 SOM1YEL059C-A 225 nt1.45□□□□□ -2.18
SEC20P28791 YDL073WYDL073W 2955 nt1.45□□□□□ -2.18
SEC20P28791 YBR099CYBR099C 384 nt1.43□□□□□ -2.18
SEC20P28791 BEM3YPL115C 3387 nt1.42□□□□□ -2.18
SEC20P28791 YDR210WYDR210W 228 nt1.42□□□□□ -2.18
SEC20P28791 SEC1YDR164C 2175 nt1.41□□□□□ -2.18
SEC20P28791 NST1YNL091W 3723 nt1.39□□□□□ -2.19
SEC20P28791 STF2YGR008C 255 nt1.39□□□□□ -2.19
SEC20P28791 SIP4YJL089W 2490 nt1.38□□□□□ -2.19
SEC20P28791 YJL127W-AYJL127W-A 117 nt1.37□□□□□ -2.19
SEC20P28791 YGR146C-AYGR146C-A 162 nt1.36□□□□□ -2.19
SEC20P28791 YNL284C-BYNL284C-B 5268 nt1.36□□□□□ -2.19
SEC20P28791 ULP2YIL031W 3105 nt1.35□□□□□ -2.19
SEC20P28791 HUG1YML058W-A 207 nt1.35□□□□□ -2.19
SEC20P28791 YBR072C-AYBR072C-A 162 nt1.32□□□□□ -2.2
SEC20P28791 SCC2YDR180W 4482 nt1.32□□□□□ -2.2
SEC20P28791 GLG1YKR058W 1851 nt1.31□□□□□ -2.2
SEC20P28791 RKR1YMR247C 4689 nt1.31□□□□□ -2.2
SEC20P28791 YPR117WYPR117W 7470 nt1.27□□□□□ -2.21
SEC20P28791 PMP2YEL017C-A 132 nt1.27□□□□□ -2.21
SEC20P28791 BIR1YJR089W 2865 nt1.25□□□□□ -2.21
SEC20P28791 BUD3YCL014W 4911 nt1.24□□□□□ -2.21
SEC20P28791 NNF2YGR089W 2811 nt1.23□□□□□ -2.21
SEC20P28791 YLL006W-AYLL006W-A 177 nt1.22□□□□□ -2.21
SEC20P28791 YNL103W-AYNL103W-A 90 nt1.22□□□□□ -2.21
SEC20P28791 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
SEC20P28791 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
SEC20P28791 YPL060C-AYPL060C-A 3315 nt1.2□□□□□ -2.22
SEC20P28791 RCO1YMR075W 2055 nt1.19□□□□□ -2.22
SEC20P28791 DOP1YDR141C 5097 nt1.18□□□□□ -2.22
SEC20P28791 VAM6YDL077C 3150 nt1.17□□□□□ -2.22
SEC20P28791 BUL2YML111W 2763 nt1.16□□□□□ -2.22
SEC20P28791 YNL266WYNL266W 420 nt1.16□□□□□ -2.22
SEC20P28791 snR61snR61 90 nt1.15□□□□□ -2.23
SEC20P28791 EMT1tM(CAU)D 73 nt1.15□□□□□ -2.23
SEC20P28791 EMT5tM(CAU)J1 73 nt1.15□□□□□ -2.23
SEC20P28791 EMT3tM(CAU)J2 73 nt1.15□□□□□ -2.23
SEC20P28791 EMT4tM(CAU)M 73 nt1.15□□□□□ -2.23
SEC20P28791 EMT2tM(CAU)O2 73 nt1.15□□□□□ -2.23
SEC20P28791 TFB5YDR079C-A 219 nt1.14□□□□□ -2.23
SEC20P28791 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
SEC20P28791 UTP20YBL004W 7482 nt1.12□□□□□ -2.23
SEC20P28791 NIP1YMR309C 2439 nt1.11□□□□□ -2.23
SEC20P28791 BEM2YER155C 6504 nt1.1□□□□□ -2.23
SEC20P28791 YOR192C-BYOR192C-B 5313 nt1.09□□□□□ -2.24
SEC20P28791 YBR178WYBR178W 375 nt1.08□□□□□ -2.24
SEC20P28791 CSE1YGL238W 2883 nt1.05□□□□□ -2.24
SEC20P28791 YMR326CYMR326C 309 nt1.05□□□□□ -2.24
SEC20P28791 YBL109WYBL109W 336 nt1.05□□□□□ -2.24
SEC20P28791 YDR524C-AYDR524C-A 120 nt1.04□□□□□ -2.24
SEC20P28791 SEC10YLR166C 2616 nt1.04□□□□□ -2.24
SEC20P28791 PET111YMR257C 2403 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms