Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
GDF1P27539 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.14■□□□□ 0.49
GDF1P27539 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
GDF1P27539 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.14■□□□□ 0.49
GDF1P27539 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.13■□□□□ 0.49
GDF1P27539 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.13■□□□□ 0.49
GDF1P27539 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.13■□□□□ 0.49
GDF1P27539 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.13■□□□□ 0.49
GDF1P27539 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.13■□□□□ 0.49
GDF1P27539 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
GDF1P27539 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
GDF1P27539 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
GDF1P27539 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDF1P27539 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GDF1P27539 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GDF1P27539 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.12■□□□□ 0.49
GDF1P27539 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 KRASP1-201ENST00000407852 552 ntBASIC18.12■□□□□ 0.49
GDF1P27539 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
GDF1P27539 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GDF1P27539 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.12■□□□□ 0.49
GDF1P27539 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.12■□□□□ 0.49
GDF1P27539 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
GDF1P27539 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.12■□□□□ 0.49
GDF1P27539 AL121906.2-201ENST00000621597 723 ntBASIC18.12■□□□□ 0.49
GDF1P27539 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
GDF1P27539 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDF1P27539 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
GDF1P27539 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.11■□□□□ 0.49
GDF1P27539 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.11■□□□□ 0.49
GDF1P27539 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.11■□□□□ 0.49
GDF1P27539 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.11■□□□□ 0.49
GDF1P27539 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
GDF1P27539 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDF1P27539 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GDF1P27539 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GDF1P27539 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
GDF1P27539 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.1■□□□□ 0.49
GDF1P27539 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.1■□□□□ 0.49
GDF1P27539 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.1■□□□□ 0.49
GDF1P27539 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDF1P27539 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
GDF1P27539 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GDF1P27539 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms