Protein–RNA interactions for Protein: P23638

PRE9, Proteasome subunit alpha type-3, yeastyeast

Known RBP Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE9P23638 snR39BsnR39B 96 nt1.7□□□□□ -2.14
PRE9P23638 YDR524C-AYDR524C-A 120 nt1.69□□□□□ -2.14
PRE9P23638 YLR232WYLR232W 348 nt1.69□□□□□ -2.14
PRE9P23638 YDL073WYDL073W 2955 nt1.68□□□□□ -2.14
PRE9P23638 COG6YNL041C 2520 nt1.68□□□□□ -2.14
PRE9P23638 UTP22YGR090W 3714 nt1.67□□□□□ -2.14
PRE9P23638 SXM1YDR395W 2835 nt1.67□□□□□ -2.14
PRE9P23638 VPS15YBR097W 4365 nt1.67□□□□□ -2.14
PRE9P23638 YOR093CYOR093C 4947 nt1.67□□□□□ -2.14
PRE9P23638 PMP2YEL017C-A 132 nt1.66□□□□□ -2.14
PRE9P23638 tM(CAU)Q2tM(CAU)Q2 78 nt1.66□□□□□ -2.14
PRE9P23638 YBL109WYBL109W 336 nt1.66□□□□□ -2.14
PRE9P23638 YDR544CYDR544C 429 nt1.65□□□□□ -2.15
PRE9P23638 IRA1YBR140C 9279 nt1.65□□□□□ -2.15
PRE9P23638 SEC8YPR055W 3198 nt1.63□□□□□ -2.15
PRE9P23638 STF2YGR008C 255 nt1.62□□□□□ -2.15
PRE9P23638 YHR131W-AYHR131W-A 246 nt1.62□□□□□ -2.15
PRE9P23638 tT(UGU)HtT(UGU)H 72 nt1.62□□□□□ -2.15
PRE9P23638 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
PRE9P23638 REV3YPL167C 4515 nt1.61□□□□□ -2.15
PRE9P23638 TFB5YDR079C-A 219 nt1.61□□□□□ -2.15
PRE9P23638 MSH3YCR092C 3057 nt1.61□□□□□ -2.15
PRE9P23638 YNL103W-AYNL103W-A 90 nt1.6□□□□□ -2.15
PRE9P23638 YLR399W-AYLR399W-A 105 nt1.58□□□□□ -2.16
PRE9P23638 YMR326CYMR326C 309 nt1.58□□□□□ -2.16
PRE9P23638 FAB1YFR019W 6837 nt1.58□□□□□ -2.16
PRE9P23638 YPR160W-AYPR160W-A 81 nt1.57□□□□□ -2.16
PRE9P23638 snR61snR61 90 nt1.56□□□□□ -2.16
PRE9P23638 YDR210WYDR210W 228 nt1.56□□□□□ -2.16
PRE9P23638 YPL060C-AYPL060C-A 3315 nt1.55□□□□□ -2.16
PRE9P23638 YMR247W-AYMR247W-A 144 nt1.54□□□□□ -2.16
PRE9P23638 FIG2YCR089W 4830 nt1.54□□□□□ -2.16
PRE9P23638 MEC1YBR136W 7107 nt1.54□□□□□ -2.16
PRE9P23638 DNF3YMR162C 4971 nt1.53□□□□□ -2.16
PRE9P23638 YJL127W-AYJL127W-A 117 nt1.53□□□□□ -2.16
PRE9P23638 BEM3YPL115C 3387 nt1.52□□□□□ -2.17
PRE9P23638 SEC1YDR164C 2175 nt1.51□□□□□ -2.17
PRE9P23638 RCO1YMR075W 2055 nt1.5□□□□□ -2.17
PRE9P23638 tN(GUU)QtN(GUU)Q 71 nt1.49□□□□□ -2.17
PRE9P23638 YGR146C-AYGR146C-A 162 nt1.49□□□□□ -2.17
PRE9P23638 YHR217CYHR217C 462 nt1.49□□□□□ -2.17
PRE9P23638 YSP1YHR155W 3687 nt1.47□□□□□ -2.17
PRE9P23638 SBH1YER087C-B 249 nt1.47□□□□□ -2.17
PRE9P23638 HKR1YDR420W 5409 nt1.47□□□□□ -2.17
PRE9P23638 BIR1YJR089W 2865 nt1.43□□□□□ -2.18
PRE9P23638 BRR2YER172C 6492 nt1.43□□□□□ -2.18
PRE9P23638 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
PRE9P23638 ULP2YIL031W 3105 nt1.42□□□□□ -2.18
PRE9P23638 UBP3YER151C 2739 nt1.41□□□□□ -2.18
PRE9P23638 YMR272W-BYMR272W-B 108 nt1.4□□□□□ -2.19
PRE9P23638 LAA1YJL207C 6045 nt1.39□□□□□ -2.19
PRE9P23638 YGL041C-BYGL041C-B 183 nt1.38□□□□□ -2.19
PRE9P23638 NNF2YGR089W 2811 nt1.37□□□□□ -2.19
PRE9P23638 NST1YNL091W 3723 nt1.36□□□□□ -2.19
PRE9P23638 GLG1YKR058W 1851 nt1.36□□□□□ -2.19
PRE9P23638 YNL266WYNL266W 420 nt1.36□□□□□ -2.19
PRE9P23638 YBR072C-AYBR072C-A 162 nt1.36□□□□□ -2.19
PRE9P23638 SSK2YNR031C 4740 nt1.35□□□□□ -2.19
PRE9P23638 PET127YOR017W 2403 nt1.35□□□□□ -2.19
PRE9P23638 SPT7YBR081C 3999 nt1.35□□□□□ -2.19
PRE9P23638 YGR130CYGR130C 2451 nt1.35□□□□□ -2.19
PRE9P23638 FYV8YGR196C 2454 nt1.34□□□□□ -2.2
PRE9P23638 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
PRE9P23638 CAT8YMR280C 4302 nt1.28□□□□□ -2.2
PRE9P23638 YDL247W-AYDL247W-A 75 nt1.28□□□□□ -2.2
PRE9P23638 YPR117WYPR117W 7470 nt1.27□□□□□ -2.21
PRE9P23638 BUL2YML111W 2763 nt1.25□□□□□ -2.21
PRE9P23638 snR81snR81 201 nt1.24□□□□□ -2.21
PRE9P23638 PIK1YNL267W 3201 nt1.23□□□□□ -2.21
PRE9P23638 YLL006W-AYLL006W-A 177 nt1.23□□□□□ -2.21
PRE9P23638 NUP192YJL039C 5052 nt1.23□□□□□ -2.21
PRE9P23638 YAL037C-AYAL037C-A 93 nt1.22□□□□□ -2.21
PRE9P23638 SCC2YDR180W 4482 nt1.22□□□□□ -2.21
PRE9P23638 YBR196C-AYBR196C-A 150 nt1.2□□□□□ -2.22
PRE9P23638 SEC10YLR166C 2616 nt1.2□□□□□ -2.22
PRE9P23638 RKR1YMR247C 4689 nt1.19□□□□□ -2.22
PRE9P23638 YNL284C-BYNL284C-B 5268 nt1.19□□□□□ -2.22
PRE9P23638 tS(GCU)Q1tS(GCU)Q1 86 nt1.18□□□□□ -2.22
PRE9P23638 CSE1YGL238W 2883 nt1.16□□□□□ -2.22
PRE9P23638 HUG1YML058W-A 207 nt1.15□□□□□ -2.23
PRE9P23638 LTE1YAL024C 4308 nt1.15□□□□□ -2.23
PRE9P23638 ANS1YHR126C 480 nt1.12□□□□□ -2.23
PRE9P23638 NIP1YMR309C 2439 nt1.12□□□□□ -2.23
PRE9P23638 YOL083C-AYOL083C-A 141 nt1.1□□□□□ -2.23
PRE9P23638 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
PRE9P23638 DOP1YDR141C 5097 nt1.09□□□□□ -2.23
PRE9P23638 snR69snR69 101 nt1.08□□□□□ -2.24
PRE9P23638 EST1YLR233C 2100 nt1.07□□□□□ -2.24
PRE9P23638 tD(GUC)QtD(GUC)Q 75 nt1.07□□□□□ -2.24
PRE9P23638 RPS26AYGL189C 360 nt1.07□□□□□ -2.24
PRE9P23638 YBL071C-BYBL071C-B 99 nt1.07□□□□□ -2.24
PRE9P23638 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
PRE9P23638 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
PRE9P23638 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
PRE9P23638 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
PRE9P23638 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
PRE9P23638 BUD3YCL014W 4911 nt1.04□□□□□ -2.24
PRE9P23638 YLR286W-AYLR286W-A 135 nt1.04□□□□□ -2.24
PRE9P23638 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
PRE9P23638 YPR137C-BYPR137C-B 5268 nt1.03□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms