Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.74■■□□□ 1.07
RFX1P22670 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX1P22670 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX1P22670 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX1P22670 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX1P22670 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX1P22670 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX1P22670 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RFX1P22670 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX1P22670 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX1P22670 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX1P22670 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 AC026366.1-201ENST00000488803 879 ntBASIC21.73■■□□□ 1.07
RFX1P22670 AP003097.1-201ENST00000530657 1135 ntBASIC21.73■■□□□ 1.07
RFX1P22670 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX1P22670 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX1P22670 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX1P22670 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.73■■□□□ 1.07
RFX1P22670 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.73■■□□□ 1.07
RFX1P22670 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX1P22670 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.73■■□□□ 1.07
RFX1P22670 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFX1P22670 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.72■■□□□ 1.07
RFX1P22670 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.72■■□□□ 1.07
RFX1P22670 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.72■■□□□ 1.07
RFX1P22670 AC008550.1-201ENST00000511500 884 ntBASIC21.72■■□□□ 1.07
RFX1P22670 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.72■■□□□ 1.07
RFX1P22670 AC073648.6-201ENST00000641589 218 ntBASIC21.72■■□□□ 1.07
RFX1P22670 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
RFX1P22670 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.72■■□□□ 1.07
RFX1P22670 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX1P22670 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.71■■□□□ 1.07
RFX1P22670 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RFX1P22670 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.71■■□□□ 1.07
RFX1P22670 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 BX119927.1-201ENST00000636596 1552 ntBASIC21.71■■□□□ 1.07
RFX1P22670 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 MIR718-201ENST00000390190 70 ntBASIC21.71■■□□□ 1.07
RFX1P22670 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RFX1P22670 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.71■■□□□ 1.07
RFX1P22670 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.71■■□□□ 1.07
RFX1P22670 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.71■■□□□ 1.07
RFX1P22670 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.71■■□□□ 1.07
RFX1P22670 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFX1P22670 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 AC105020.6-201ENST00000621523 1217 ntBASIC21.71■■□□□ 1.07
RFX1P22670 FAM197Y4-202ENST00000622692 608 ntBASIC21.71■■□□□ 1.07
RFX1P22670 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.71■■□□□ 1.07
RFX1P22670 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX1P22670 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.71■■□□□ 1.07
RFX1P22670 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RFX1P22670 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX1P22670 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX1P22670 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 LSM12P1-201ENST00000411836 588 ntBASIC21.7■■□□□ 1.06
RFX1P22670 UBE2SP1-201ENST00000450587 669 ntBASIC21.7■■□□□ 1.06
RFX1P22670 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RFX1P22670 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
RFX1P22670 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
RFX1P22670 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX1P22670 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms