Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPN3P20807 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.19■□□□□ 0.66
CAPN3P20807 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.19■□□□□ 0.66
CAPN3P20807 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPN3P20807 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPN3P20807 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.19■□□□□ 0.66
CAPN3P20807 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN3P20807 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN3P20807 TNXA-203ENST00000507684 2038 ntBASIC19.18■□□□□ 0.66
CAPN3P20807 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.18■□□□□ 0.66
CAPN3P20807 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN3P20807 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN3P20807 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.18■□□□□ 0.66
CAPN3P20807 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 FAM21FP-204ENST00000608637 956 ntBASIC19.18■□□□□ 0.66
CAPN3P20807 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CAPN3P20807 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CAPN3P20807 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN3P20807 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN3P20807 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN3P20807 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN3P20807 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CAPN3P20807 KRT18P20-201ENST00000548986 1279 ntBASIC19.17■□□□□ 0.66
CAPN3P20807 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN3P20807 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN3P20807 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.17■□□□□ 0.66
CAPN3P20807 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPN3P20807 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CAPN3P20807 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 GPX1P1-201ENST00000388829 606 ntBASIC19.16■□□□□ 0.66
CAPN3P20807 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 KRT18P11-201ENST00000435214 1283 ntBASIC19.16■□□□□ 0.66
CAPN3P20807 CROCCP5-201ENST00000436658 830 ntBASIC19.16■□□□□ 0.66
CAPN3P20807 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.16■□□□□ 0.66
CAPN3P20807 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN3P20807 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN3P20807 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN3P20807 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPN3P20807 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CAPN3P20807 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CAPN3P20807 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN3P20807 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms