Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT4P19013 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT4P19013 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT4P19013 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT4P19013 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT4P19013 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 RBM17P2-201ENST00000616397 1405 ntBASIC20.02■□□□□ 0.8
KRT4P19013 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.02■□□□□ 0.8
KRT4P19013 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
KRT4P19013 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.02■□□□□ 0.8
KRT4P19013 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT4P19013 CCDC92B-201ENST00000575506 885 ntBASIC20.02■□□□□ 0.8
KRT4P19013 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT4P19013 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT4P19013 AC243732.1-201ENST00000612648 864 ntBASIC20.02■□□□□ 0.8
KRT4P19013 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.02■□□□□ 0.8
KRT4P19013 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT4P19013 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT4P19013 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.02■□□□□ 0.79
KRT4P19013 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT4P19013 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT4P19013 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT4P19013 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
KRT4P19013 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
KRT4P19013 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 AC105265.2-201ENST00000467189 838 ntBASIC20.01■□□□□ 0.79
KRT4P19013 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 SUDS3P1-201ENST00000505831 966 ntBASIC20.01■□□□□ 0.79
KRT4P19013 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT4P19013 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
KRT4P19013 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT4P19013 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT4P19013 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT4P19013 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20■□□□□ 0.79
KRT4P19013 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KRT4P19013 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT4P19013 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT4P19013 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
KRT4P19013 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
KRT4P19013 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT4P19013 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20■□□□□ 0.79
KRT4P19013 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20■□□□□ 0.79
KRT4P19013 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20■□□□□ 0.79
KRT4P19013 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20■□□□□ 0.79
KRT4P19013 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
KRT4P19013 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20■□□□□ 0.79
KRT4P19013 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20■□□□□ 0.79
KRT4P19013 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20■□□□□ 0.79
KRT4P19013 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20■□□□□ 0.79
KRT4P19013 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT4P19013 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT4P19013 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT4P19013 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
KRT4P19013 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT4P19013 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.99■□□□□ 0.79
KRT4P19013 KRT18P20-201ENST00000548986 1279 ntBASIC19.99■□□□□ 0.79
KRT4P19013 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT4P19013 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT4P19013 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT4P19013 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms