Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.52■□□□□ 0.4
ATF1P18846 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF1P18846 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF1P18846 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF1P18846 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATF1P18846 SLC7A5P1-201ENST00000568957 537 ntBASIC17.52■□□□□ 0.4
ATF1P18846 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.52■□□□□ 0.4
ATF1P18846 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATF1P18846 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATF1P18846 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATF1P18846 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ATF1P18846 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATF1P18846 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATF1P18846 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.52■□□□□ 0.39
ATF1P18846 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF1P18846 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.51■□□□□ 0.39
ATF1P18846 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATF1P18846 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATF1P18846 AC007322.3-201ENST00000426526 701 ntBASIC17.51■□□□□ 0.39
ATF1P18846 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF1P18846 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.51■□□□□ 0.39
ATF1P18846 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF1P18846 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.51■□□□□ 0.39
ATF1P18846 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ATF1P18846 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 DPP3P2-201ENST00000416030 1696 ntBASIC17.51■□□□□ 0.39
ATF1P18846 AC093503.3-201ENST00000624917 2352 ntBASIC17.51■□□□□ 0.39
ATF1P18846 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATF1P18846 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATF1P18846 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATF1P18846 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 BX119927.1-201ENST00000636596 1552 ntBASIC17.5■□□□□ 0.39
ATF1P18846 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
ATF1P18846 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATF1P18846 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.5■□□□□ 0.39
ATF1P18846 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATF1P18846 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.5■□□□□ 0.39
ATF1P18846 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.5■□□□□ 0.39
ATF1P18846 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ATF1P18846 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATF1P18846 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
ATF1P18846 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ATF1P18846 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.49■□□□□ 0.39
ATF1P18846 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF1P18846 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF1P18846 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.49■□□□□ 0.39
ATF1P18846 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF1P18846 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.49■□□□□ 0.39
ATF1P18846 AC019069.1-201ENST00000610008 1333 ntBASIC17.48■□□□□ 0.39
ATF1P18846 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 Z82202.1-201ENST00000623446 1880 ntBASIC17.48■□□□□ 0.39
ATF1P18846 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.48■□□□□ 0.39
ATF1P18846 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF1P18846 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms