| MUC1 | P15941 | AC018445.3-201 | ENST00000624177 | 1945 nt | BASIC | 17.08 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | RFT1-202 | ENST00000394738 | 1800 nt | TSL 5 BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ZNF282-203 | ENST00000479907 | 1815 nt | TSL 2 BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | KRT8P36-201 | ENST00000489121 | 1440 nt | BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | HCG18-235 | ENST00000426882 | 4862 nt | TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | GDF15-201 | ENST00000252809 | 1200 nt | APPRIS P1 TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PPP1CA-202 | ENST00000358239 | 1054 nt | TSL 2 BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | TSPY6P-201 | ENST00000448518 | 926 nt | BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | LHX9-206 | ENST00000561173 | 2144 nt | TSL 5 BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | WT1-AS_3.1-201 | ENST00000613262 | 234 nt | BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ZNF692-204 | ENST00000451251 | 2065 nt | APPRIS ALT2 TSL 2 BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CTU2-210 | ENST00000567949 | 1905 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PARP2-202 | ENST00000429687 | 1881 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SNX27-204 | ENST00000458013 | 6403 nt | APPRIS ALT1 TSL 5 BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FSCN2-202 | ENST00000417245 | 1665 nt | APPRIS P1 TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FAM217A-201 | ENST00000274673 | 2265 nt | APPRIS P1 TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FPGS-203 | ENST00000373247 | 2279 nt | APPRIS P1 TSL 1 (best) BASIC | 17.07 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NRXN2-201 | ENST00000265459 | 6621 nt | APPRIS P3 TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SMUG1-202 | ENST00000337581 | 1571 nt | APPRIS P1 TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PDE4DIP-214 | ENST00000479408 | 2746 nt | TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | RASL12-201 | ENST00000220062 | 2640 nt | APPRIS P1 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NKX6-1-201 | ENST00000295886 | 2628 nt | APPRIS P1 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CNRIP1-201 | ENST00000263655 | 1953 nt | APPRIS P1 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | TMEM51-201 | ENST00000376008 | 1931 nt | APPRIS P1 TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | APLP2-204 | ENST00000345598 | 1862 nt | TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NFS1-201 | ENST00000306750 | 738 nt | TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SMNDC1-201 | ENST00000369592 | 1110 nt | APPRIS P1 TSL 3 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | LSM12P1-201 | ENST00000411836 | 588 nt | BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NCAPD3-204 | ENST00000526422 | 1060 nt | APPRIS ALT2 TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PHB2-213 | ENST00000546111 | 858 nt | TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CIRBP-214 | ENST00000587896 | 1081 nt | TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AC027307.1-201 | ENST00000590252 | 457 nt | TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AL109923.1-201 | ENST00000618799 | 583 nt | BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AL772284.2-201 | ENST00000620151 | 1147 nt | APPRIS P1 TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AC105020.6-201 | ENST00000621523 | 1217 nt | BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | MARS-234 | ENST00000630571 | 216 nt | TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | MARS-235 | ENST00000630803 | 183 nt | TSL 3 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AC000035.1-201 | ENST00000634116 | 343 nt | TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | DDX59-201 | ENST00000331314 | 2289 nt | APPRIS P1 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | DOK7-206 | ENST00000515886 | 2263 nt | TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FAM129C-201 | ENST00000332386 | 2222 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CDH5-202 | ENST00000539168 | 1672 nt | TSL 2 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SCARB1-201 | ENST00000261693 | 2611 nt | APPRIS P1 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ACTR5-201 | ENST00000243903 | 2565 nt | APPRIS P1 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | KMT5B-201 | ENST00000304363 | 5837 nt | APPRIS P1 TSL 5 BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ARHGAP9-202 | ENST00000393797 | 2912 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ENTPD2-201 | ENST00000312665 | 1500 nt | TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | IRF7-204 | ENST00000397570 | 1943 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.06 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | RNASET2-203 | ENST00000366855 | 1417 nt | TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NR1H2-211 | ENST00000599105 | 1830 nt | APPRIS ALT2 TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AQP11-201 | ENST00000313578 | 2152 nt | APPRIS P1 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | EXTL3-213 | ENST00000523149 | 1779 nt | TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PRPS1-203 | ENST00000372428 | 1748 nt | TSL 2 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | TMPO-201 | ENST00000261210 | 820 nt | TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | HES2-205 | ENST00000487437 | 968 nt | TSL 3 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FBXL8-203 | ENST00000518148 | 1054 nt | TSL 2 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | OGFR-204 | ENST00000621591 | 1194 nt | TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PFKL-212 | ENST00000628044 | 129 nt | TSL 3 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ZNF510-203 | ENST00000375231 | 5616 nt | APPRIS P1 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FDXR-204 | ENST00000442102 | 1967 nt | TSL 2 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AP005212.1-201 | ENST00000581547 | 1997 nt | BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | TDRD10-202 | ENST00000368482 | 2331 nt | APPRIS P3 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ME2-216 | ENST00000639850 | 2331 nt | TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | TOLLIP-201 | ENST00000263646 | 2283 nt | TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SLC12A4-202 | ENST00000422611 | 4670 nt | TSL 2 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ZNF385B-204 | ENST00000410066 | 3288 nt | APPRIS P1 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AMZ1-202 | ENST00000407112 | 1862 nt | TSL 2 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ZNF534-201 | ENST00000301085 | 1525 nt | TSL 2 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | PTX4-203 | ENST00000447419 | 1516 nt | APPRIS ALT2 TSL 5 BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | GNA15-201 | ENST00000262958 | 2133 nt | APPRIS P1 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ZNF331-214 | ENST00000511154 | 2120 nt | APPRIS P1 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ACAT1-201 | ENST00000265838 | 1761 nt | APPRIS P1 TSL 1 (best) BASIC | 17.05 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CCS-208 | ENST00000533244 | 1430 nt | APPRIS P1 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | MATK-215 | ENST00000619596 | 1740 nt | APPRIS P4 TSL 2 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | MTFP1-201 | ENST00000266263 | 1370 nt | APPRIS P1 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | DGKZ-203 | ENST00000421244 | 2862 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | LRRC25-202 | ENST00000595840 | 1924 nt | APPRIS P1 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | TCAIM-203 | ENST00000396078 | 2178 nt | TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | BID-203 | ENST00000399765 | 1879 nt | TSL 2 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | FBXO41-204 | ENST00000520530 | 3293 nt | APPRIS P1 TSL 5 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NAA20-202 | ENST00000334982 | 1260 nt | APPRIS P1 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CLDN3-201 | ENST00000395145 | 1274 nt | APPRIS P1 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | BX276092.2-201 | ENST00000417668 | 665 nt | BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | AL355472.2-201 | ENST00000422958 | 438 nt | BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | BEAN1-AS1-201 | ENST00000564618 | 533 nt | TSL 4 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SDHAF3-202 | ENST00000432641 | 2060 nt | APPRIS P1 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | RBM6-204 | ENST00000422955 | 2324 nt | TSL 2 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | RPH3A-203 | ENST00000543106 | 2581 nt | APPRIS ALT2 TSL 2 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | MRFAP1-201 | ENST00000320912 | 2049 nt | APPRIS P1 TSL 2 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | NOP14-202 | ENST00000398071 | 2535 nt | APPRIS ALT2 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ARHGAP8-204 | ENST00000389774 | 1725 nt | APPRIS ALT2 TSL 2 BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | GAS6-201 | ENST00000327773 | 2490 nt | APPRIS P1 TSL 1 (best) BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SMG8-203 | ENST00000578922 | 2178 nt | BASIC | 17.04 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | UBP1-202 | ENST00000283629 | 4148 nt | APPRIS P3 TSL 1 (best) BASIC | 17.03 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | CEP55-201 | ENST00000371485 | 2638 nt | APPRIS P1 TSL 1 (best) BASIC | 17.03 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | ANKRD65-204 | ENST00000520296 | 1632 nt | TSL 1 (best) BASIC | 17.03 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | HMOX2-208 | ENST00000570646 | 2147 nt | APPRIS P1 TSL 1 (best) BASIC | 17.03 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | GABRD-213 | ENST00000640067 | 1632 nt | APPRIS ALT2 TSL 5 BASIC | 17.03 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | HOXB9-201 | ENST00000311177 | 2581 nt | APPRIS P1 TSL 1 (best) BASIC | 17.03 | ■□□□□ 0.32 | | |
| MUC1 | P15941 | SLC44A3-203 | ENST00000446120 | 2094 nt | TSL 2 BASIC | 17.03 | ■□□□□ 0.32 | | |