Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CFTRP13569 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CFTRP13569 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC34.54■■■■□ 3.12
CFTRP13569 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CFTRP13569 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC34.54■■■■□ 3.12
CFTRP13569 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CFTRP13569 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
CFTRP13569 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
CFTRP13569 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
CFTRP13569 DBP-204ENST00000599385 709 ntTSL 3 BASIC34.53■■■■□ 3.12
CFTRP13569 AC139887.4-201ENST00000607877 719 ntBASIC34.53■■■■□ 3.12
CFTRP13569 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC34.53■■■■□ 3.12
CFTRP13569 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC34.53■■■■□ 3.12
CFTRP13569 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
CFTRP13569 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CFTRP13569 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CFTRP13569 DYM-203ENST00000442713 2147 ntTSL 2 BASIC34.53■■■■□ 3.12
CFTRP13569 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CFTRP13569 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC34.52■■■■□ 3.12
CFTRP13569 RNF152P1-201ENST00000397754 604 ntBASIC34.52■■■■□ 3.12
CFTRP13569 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC34.52■■■■□ 3.12
CFTRP13569 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CFTRP13569 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC34.52■■■■□ 3.12
CFTRP13569 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
CFTRP13569 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CFTRP13569 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC34.52■■■■□ 3.12
CFTRP13569 KRT18P48-201ENST00000434763 852 ntBASIC34.52■■■■□ 3.12
CFTRP13569 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC34.52■■■■□ 3.12
CFTRP13569 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CFTRP13569 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC34.51■■■■□ 3.12
CFTRP13569 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CFTRP13569 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.11
CFTRP13569 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CFTRP13569 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CFTRP13569 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CFTRP13569 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC34.51■■■■□ 3.11
CFTRP13569 KRT18P16-201ENST00000510337 1294 ntBASIC34.51■■■■□ 3.11
CFTRP13569 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
CFTRP13569 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC34.51■■■■□ 3.11
CFTRP13569 AP000692.2-201ENST00000608391 879 ntBASIC34.51■■■■□ 3.11
CFTRP13569 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC34.51■■■■□ 3.11
CFTRP13569 C9orf163-202ENST00000624034 2573 ntBASIC34.51■■■■□ 3.11
CFTRP13569 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CFTRP13569 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
CFTRP13569 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC34.5■■■■□ 3.11
CFTRP13569 YBX1P10-201ENST00000444752 975 ntBASIC34.5■■■■□ 3.11
CFTRP13569 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC34.5■■■■□ 3.11
CFTRP13569 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CFTRP13569 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC34.5■■■■□ 3.11
CFTRP13569 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CFTRP13569 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC34.5■■■■□ 3.11
CFTRP13569 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CFTRP13569 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC34.5■■■■□ 3.11
CFTRP13569 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CFTRP13569 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CFTRP13569 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC34.49■■■■□ 3.11
CFTRP13569 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
CFTRP13569 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC34.49■■■■□ 3.11
CFTRP13569 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CFTRP13569 TPM4P1-201ENST00000436100 807 ntBASIC34.49■■■■□ 3.11
CFTRP13569 FAM86EP-206ENST00000510506 987 ntBASIC34.49■■■■□ 3.11
CFTRP13569 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC34.49■■■■□ 3.11
CFTRP13569 AL121956.5-201ENST00000625261 221 ntBASIC34.49■■■■□ 3.11
CFTRP13569 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CFTRP13569 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC34.49■■■■□ 3.11
CFTRP13569 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC34.48■■■■□ 3.11
CFTRP13569 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CFTRP13569 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CFTRP13569 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC34.48■■■■□ 3.11
CFTRP13569 RCC2P6-201ENST00000526625 1557 ntBASIC34.48■■■■□ 3.11
CFTRP13569 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CFTRP13569 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CFTRP13569 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
CFTRP13569 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CFTRP13569 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CFTRP13569 AP006587.1-201ENST00000534129 1502 ntBASIC34.47■■■■□ 3.11
CFTRP13569 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC34.47■■■■□ 3.11
CFTRP13569 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC34.47■■■■□ 3.11
CFTRP13569 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC34.47■■■■□ 3.11
CFTRP13569 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
CFTRP13569 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CFTRP13569 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
CFTRP13569 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CFTRP13569 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC34.46■■■■□ 3.11
CFTRP13569 SLC25A1P4-201ENST00000567977 778 ntBASIC34.46■■■■□ 3.11
CFTRP13569 TUB-203ENST00000534099 1759 ntTSL 2 BASIC34.46■■■■□ 3.11
CFTRP13569 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC34.46■■■■□ 3.11
CFTRP13569 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC34.46■■■■□ 3.11
CFTRP13569 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CFTRP13569 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC34.46■■■■□ 3.11
CFTRP13569 STK25-204ENST00000405585 1643 ntTSL 2 BASIC34.45■■■■□ 3.11
CFTRP13569 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CFTRP13569 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CFTRP13569 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11
CFTRP13569 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC34.45■■■■□ 3.11
CFTRP13569 H19-201ENST00000411754 1788 ntTSL 5 BASIC34.45■■■■□ 3.11
CFTRP13569 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CFTRP13569 FAM207BP-201ENST00000447172 505 ntBASIC34.45■■■■□ 3.1
CFTRP13569 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.1
CFTRP13569 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC34.45■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms