Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNB1P11230 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNB1P11230 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CHRNB1P11230 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNB1P11230 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNB1P11230 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNB1P11230 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHRNB1P11230 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNB1P11230 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNB1P11230 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNB1P11230 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHRNB1P11230 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNB1P11230 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRNB1P11230 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNB1P11230 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 GUSBP5-202ENST00000510805 1989 ntBASIC20.31■□□□□ 0.84
CHRNB1P11230 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHRNB1P11230 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRNB1P11230 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRNB1P11230 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CHRNB1P11230 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHRNB1P11230 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRNB1P11230 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHRNB1P11230 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CHRNB1P11230 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRNB1P11230 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRNB1P11230 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRNB1P11230 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.29■□□□□ 0.84
CHRNB1P11230 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.29■□□□□ 0.84
CHRNB1P11230 KRT16P1-201ENST00000399124 1418 ntBASIC20.29■□□□□ 0.84
CHRNB1P11230 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CHRNB1P11230 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.29■□□□□ 0.84
CHRNB1P11230 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNB1P11230 SLC25A3P1-201ENST00000443844 931 ntBASIC20.29■□□□□ 0.84
CHRNB1P11230 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.29■□□□□ 0.84
CHRNB1P11230 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNB1P11230 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.29■□□□□ 0.84
CHRNB1P11230 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.29■□□□□ 0.84
CHRNB1P11230 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.29■□□□□ 0.84
CHRNB1P11230 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHRNB1P11230 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRNB1P11230 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRNB1P11230 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRNB1P11230 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRNB1P11230 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRNB1P11230 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHRNB1P11230 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRNB1P11230 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRNB1P11230 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
CHRNB1P11230 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.28■□□□□ 0.84
CHRNB1P11230 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHRNB1P11230 LINC00565-201ENST00000562710 2331 ntBASIC20.27■□□□□ 0.84
CHRNB1P11230 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHRNB1P11230 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms