Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 AC068338.2-201ENST00000563278 1430 ntBASIC18.2■□□□□ 0.5
HIST1H2ABP04908 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H2ABP04908 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HIST1H2ABP04908 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 CNN2P6-201ENST00000439038 900 ntBASIC18.18■□□□□ 0.5
HIST1H2ABP04908 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H2ABP04908 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H2ABP04908 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 KRT18P68-201ENST00000392293 1000 ntBASIC18.16■□□□□ 0.5
HIST1H2ABP04908 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 AC022517.1-201ENST00000592429 346 ntBASIC18.16■□□□□ 0.5
HIST1H2ABP04908 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.16■□□□□ 0.5
HIST1H2ABP04908 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms