Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.97■■□□□ 1.11
VTNP04004 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VTNP04004 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VTNP04004 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
VTNP04004 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
VTNP04004 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.96■■□□□ 1.11
VTNP04004 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTNP04004 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTNP04004 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
VTNP04004 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTNP04004 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
VTNP04004 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.96■■□□□ 1.11
VTNP04004 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
VTNP04004 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VTNP04004 KRT16P5-201ENST00000455284 522 ntBASIC21.96■■□□□ 1.11
VTNP04004 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.96■■□□□ 1.11
VTNP04004 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.96■■□□□ 1.11
VTNP04004 AP001412.1-201ENST00000608405 714 ntBASIC21.96■■□□□ 1.11
VTNP04004 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.96■■□□□ 1.11
VTNP04004 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTNP04004 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VTNP04004 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.95■■□□□ 1.1
VTNP04004 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.95■■□□□ 1.1
VTNP04004 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
VTNP04004 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
VTNP04004 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
VTNP04004 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
VTNP04004 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.95■■□□□ 1.1
VTNP04004 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.95■■□□□ 1.1
VTNP04004 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
VTNP04004 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.95■■□□□ 1.1
VTNP04004 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.95■■□□□ 1.1
VTNP04004 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 AL137060.1-201ENST00000618151 2648 ntBASIC21.95■■□□□ 1.1
VTNP04004 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 HTR7P1-201ENST00000538670 1336 ntBASIC21.95■■□□□ 1.1
VTNP04004 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.95■■□□□ 1.1
VTNP04004 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
VTNP04004 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.95■■□□□ 1.1
VTNP04004 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTNP04004 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.94■■□□□ 1.1
VTNP04004 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.94■■□□□ 1.1
VTNP04004 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.94■■□□□ 1.1
VTNP04004 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.94■■□□□ 1.1
VTNP04004 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.94■■□□□ 1.1
VTNP04004 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTNP04004 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.94■■□□□ 1.1
VTNP04004 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.94■■□□□ 1.1
VTNP04004 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.93■■□□□ 1.1
VTNP04004 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
VTNP04004 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.93■■□□□ 1.1
VTNP04004 TSPY15P-201ENST00000457163 923 ntBASIC21.93■■□□□ 1.1
VTNP04004 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.93■■□□□ 1.1
VTNP04004 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.93■■□□□ 1.1
VTNP04004 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.93■■□□□ 1.1
VTNP04004 SMG8-203ENST00000578922 2178 ntBASIC21.93■■□□□ 1.1
VTNP04004 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.93■■□□□ 1.1
VTNP04004 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.93■■□□□ 1.1
VTNP04004 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.93■■□□□ 1.1
VTNP04004 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.93■■□□□ 1.1
VTNP04004 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VTNP04004 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
VTNP04004 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VTNP04004 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 KRT17P2-201ENST00000300992 1314 ntBASIC21.92■■□□□ 1.1
VTNP04004 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VTNP04004 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
VTNP04004 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.92■■□□□ 1.1
VTNP04004 AF186192.3-201ENST00000583427 947 ntBASIC21.92■■□□□ 1.1
VTNP04004 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.92■■□□□ 1.1
VTNP04004 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTNP04004 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms