Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TIMP1P01033 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMP1P01033 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 RNF152P1-201ENST00000397754 604 ntBASIC21.75■■□□□ 1.07
TIMP1P01033 AC004980.1-204ENST00000429707 299 ntBASIC21.75■■□□□ 1.07
TIMP1P01033 TPM4P1-201ENST00000436100 807 ntBASIC21.75■■□□□ 1.07
TIMP1P01033 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.75■■□□□ 1.07
TIMP1P01033 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.75■■□□□ 1.07
TIMP1P01033 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TIMP1P01033 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.75■■□□□ 1.07
TIMP1P01033 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.75■■□□□ 1.07
TIMP1P01033 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.75■■□□□ 1.07
TIMP1P01033 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIMP1P01033 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TIMP1P01033 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.74■■□□□ 1.07
TIMP1P01033 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.74■■□□□ 1.07
TIMP1P01033 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.74■■□□□ 1.07
TIMP1P01033 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TIMP1P01033 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.74■■□□□ 1.07
TIMP1P01033 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.74■■□□□ 1.07
TIMP1P01033 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.74■■□□□ 1.07
TIMP1P01033 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.74■■□□□ 1.07
TIMP1P01033 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.74■■□□□ 1.07
TIMP1P01033 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 AC139887.4-201ENST00000607877 719 ntBASIC21.74■■□□□ 1.07
TIMP1P01033 AL138966.2-201ENST00000621997 464 ntBASIC21.74■■□□□ 1.07
TIMP1P01033 AC131212.4-201ENST00000623606 975 ntBASIC21.74■■□□□ 1.07
TIMP1P01033 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TIMP1P01033 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
TIMP1P01033 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.74■■□□□ 1.07
TIMP1P01033 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.73■■□□□ 1.07
TIMP1P01033 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.73■■□□□ 1.07
TIMP1P01033 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.73■■□□□ 1.07
TIMP1P01033 AP000550.4-202ENST00000639755 178 ntBASIC21.73■■□□□ 1.07
TIMP1P01033 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMP1P01033 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TIMP1P01033 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.72■■□□□ 1.07
TIMP1P01033 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 AC009947.2-201ENST00000444014 672 ntBASIC21.72■■□□□ 1.07
TIMP1P01033 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.72■■□□□ 1.07
TIMP1P01033 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.72■■□□□ 1.07
TIMP1P01033 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TIMP1P01033 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMP1P01033 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.71■■□□□ 1.07
TIMP1P01033 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMP1P01033 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TIMP1P01033 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.71■■□□□ 1.07
TIMP1P01033 TSPY5P-201ENST00000426936 936 ntBASIC21.71■■□□□ 1.07
TIMP1P01033 SLC25A1P4-201ENST00000567977 778 ntBASIC21.71■■□□□ 1.07
TIMP1P01033 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TIMP1P01033 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.71■■□□□ 1.07
TIMP1P01033 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.71■■□□□ 1.07
TIMP1P01033 AC130371.2-201ENST00000619443 611 ntBASIC21.71■■□□□ 1.07
TIMP1P01033 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMP1P01033 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TIMP1P01033 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TIMP1P01033 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMP1P01033 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.71■■□□□ 1.07
TIMP1P01033 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.71■■□□□ 1.07
TIMP1P01033 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMP1P01033 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMP1P01033 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TIMP1P01033 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.7■■□□□ 1.06
TIMP1P01033 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms