Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAF4O95104 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAF4O95104 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAF4O95104 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
SCAF4O95104 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAF4O95104 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAF4O95104 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SCAF4O95104 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SCAF4O95104 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAF4O95104 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAF4O95104 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAF4O95104 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAF4O95104 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAF4O95104 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAF4O95104 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCAF4O95104 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAF4O95104 AC053503.5-201ENST00000601508 636 ntBASIC16.29■□□□□ 0.2
SCAF4O95104 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAF4O95104 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAF4O95104 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCAF4O95104 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SCAF4O95104 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAF4O95104 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCAF4O95104 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAF4O95104 AC005224.4-201ENST00000583262 1652 ntBASIC16.28■□□□□ 0.2
SCAF4O95104 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SCAF4O95104 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.28■□□□□ 0.2
SCAF4O95104 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.28■□□□□ 0.2
SCAF4O95104 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAF4O95104 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCAF4O95104 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAF4O95104 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAF4O95104 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAF4O95104 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SCAF4O95104 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAF4O95104 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAF4O95104 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAF4O95104 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAF4O95104 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
SCAF4O95104 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCAF4O95104 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.27■□□□□ 0.2
SCAF4O95104 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCAF4O95104 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.27■□□□□ 0.2
SCAF4O95104 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCAF4O95104 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.27■□□□□ 0.19
SCAF4O95104 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCAF4O95104 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.27■□□□□ 0.19
SCAF4O95104 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCAF4O95104 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms