Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
LTN1O94822 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LTN1O94822 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LTN1O94822 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.69■■□□□ 1.86
LTN1O94822 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26.69■■□□□ 1.86
LTN1O94822 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.69■■□□□ 1.86
LTN1O94822 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC26.69■■□□□ 1.86
LTN1O94822 CR392000.1-201ENST00000624770 1228 ntBASIC26.69■■□□□ 1.86
LTN1O94822 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.69■■□□□ 1.86
LTN1O94822 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.69■■□□□ 1.86
LTN1O94822 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LTN1O94822 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LTN1O94822 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
LTN1O94822 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.69■■□□□ 1.86
LTN1O94822 C2orf69P3-201ENST00000565542 1120 ntBASIC26.69■■□□□ 1.86
LTN1O94822 AL049597.2-201ENST00000565575 961 ntBASIC26.69■■□□□ 1.86
LTN1O94822 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LTN1O94822 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.69■■□□□ 1.86
LTN1O94822 KRT8P17-201ENST00000453110 1448 ntBASIC26.68■■□□□ 1.86
LTN1O94822 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.68■■□□□ 1.86
LTN1O94822 LINC01568-207ENST00000641790 1380 ntBASIC26.68■■□□□ 1.86
LTN1O94822 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
LTN1O94822 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
LTN1O94822 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LTN1O94822 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC26.67■■□□□ 1.86
LTN1O94822 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LTN1O94822 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.67■■□□□ 1.86
LTN1O94822 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LTN1O94822 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26.67■■□□□ 1.86
LTN1O94822 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC26.67■■□□□ 1.86
LTN1O94822 MESTP1-201ENST00000404287 994 ntBASIC26.67■■□□□ 1.86
LTN1O94822 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
LTN1O94822 FITM1-202ENST00000559294 800 ntBASIC26.67■■□□□ 1.86
LTN1O94822 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC26.67■■□□□ 1.86
LTN1O94822 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LTN1O94822 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
LTN1O94822 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
LTN1O94822 DPP3P2-201ENST00000416030 1696 ntBASIC26.67■■□□□ 1.86
LTN1O94822 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
LTN1O94822 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.66■■□□□ 1.86
LTN1O94822 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC26.66■■□□□ 1.86
LTN1O94822 DGCR10-201ENST00000609839 495 ntBASIC26.66■■□□□ 1.86
LTN1O94822 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 AL031985.4-201ENST00000642138 673 ntBASIC26.66■■□□□ 1.86
LTN1O94822 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.66■■□□□ 1.86
LTN1O94822 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
LTN1O94822 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.66■■□□□ 1.86
LTN1O94822 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC26.66■■□□□ 1.86
LTN1O94822 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.66■■□□□ 1.86
LTN1O94822 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.65■■□□□ 1.86
LTN1O94822 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LTN1O94822 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LTN1O94822 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
LTN1O94822 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.65■■□□□ 1.86
LTN1O94822 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.65■■□□□ 1.86
LTN1O94822 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
LTN1O94822 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.65■■□□□ 1.86
LTN1O94822 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LTN1O94822 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LTN1O94822 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LTN1O94822 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.64■■□□□ 1.86
LTN1O94822 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
LTN1O94822 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
LTN1O94822 AC133561.1-201ENST00000568600 2415 ntBASIC26.64■■□□□ 1.86
LTN1O94822 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
LTN1O94822 AC006128.1-201ENST00000624704 1661 ntBASIC26.64■■□□□ 1.85
LTN1O94822 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
LTN1O94822 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
LTN1O94822 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC26.63■■□□□ 1.85
LTN1O94822 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC26.63■■□□□ 1.85
LTN1O94822 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26.63■■□□□ 1.85
LTN1O94822 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
LTN1O94822 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
LTN1O94822 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC26.63■■□□□ 1.85
LTN1O94822 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTN1O94822 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
LTN1O94822 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.63■■□□□ 1.85
LTN1O94822 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC26.63■■□□□ 1.85
LTN1O94822 NAPSB-206ENST00000562112 1266 ntBASIC26.63■■□□□ 1.85
LTN1O94822 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC26.63■■□□□ 1.85
LTN1O94822 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.63■■□□□ 1.85
LTN1O94822 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms