Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ITM2AO43736 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.58■□□□□ 0.73
ITM2AO43736 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITM2AO43736 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITM2AO43736 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITM2AO43736 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.58■□□□□ 0.72
ITM2AO43736 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ITM2AO43736 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.58■□□□□ 0.72
ITM2AO43736 SLC7A5P1-201ENST00000568957 537 ntBASIC19.58■□□□□ 0.72
ITM2AO43736 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ITM2AO43736 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITM2AO43736 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ITM2AO43736 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ITM2AO43736 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ITM2AO43736 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITM2AO43736 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.57■□□□□ 0.72
ITM2AO43736 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.57■□□□□ 0.72
ITM2AO43736 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.57■□□□□ 0.72
ITM2AO43736 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 AL356652.1-201ENST00000615962 565 ntBASIC19.57■□□□□ 0.72
ITM2AO43736 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ITM2AO43736 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
ITM2AO43736 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.57■□□□□ 0.72
ITM2AO43736 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 AC004854.2-201ENST00000608450 1441 ntBASIC19.57■□□□□ 0.72
ITM2AO43736 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
ITM2AO43736 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITM2AO43736 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ITM2AO43736 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ITM2AO43736 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.56■□□□□ 0.72
ITM2AO43736 TERF1P2-201ENST00000583350 1212 ntBASIC19.56■□□□□ 0.72
ITM2AO43736 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.56■□□□□ 0.72
ITM2AO43736 AL139246.5-201ENST00000606645 996 ntBASIC19.56■□□□□ 0.72
ITM2AO43736 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.56■□□□□ 0.72
ITM2AO43736 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.56■□□□□ 0.72
ITM2AO43736 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.56■□□□□ 0.72
ITM2AO43736 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.56■□□□□ 0.72
ITM2AO43736 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITM2AO43736 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ITM2AO43736 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.55■□□□□ 0.72
ITM2AO43736 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.55■□□□□ 0.72
ITM2AO43736 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.55■□□□□ 0.72
ITM2AO43736 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.55■□□□□ 0.72
ITM2AO43736 CDV3P1-201ENST00000471403 739 ntBASIC19.55■□□□□ 0.72
ITM2AO43736 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.55■□□□□ 0.72
ITM2AO43736 AC009237.14-201ENST00000609975 1594 ntBASIC19.55■□□□□ 0.72
ITM2AO43736 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
ITM2AO43736 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITM2AO43736 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ITM2AO43736 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.55■□□□□ 0.72
ITM2AO43736 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITM2AO43736 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITM2AO43736 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITM2AO43736 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITM2AO43736 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITM2AO43736 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
ITM2AO43736 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.54■□□□□ 0.72
ITM2AO43736 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ITM2AO43736 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms