Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.87■□□□□ 0.77
PHGDHO43175 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PHGDHO43175 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.87■□□□□ 0.77
PHGDHO43175 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PHGDHO43175 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 PTBP1P-201ENST00000554374 1601 ntBASIC19.87■□□□□ 0.77
PHGDHO43175 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 AC068338.2-201ENST00000563278 1430 ntBASIC19.86■□□□□ 0.77
PHGDHO43175 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.86■□□□□ 0.77
PHGDHO43175 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.86■□□□□ 0.77
PHGDHO43175 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.86■□□□□ 0.77
PHGDHO43175 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.86■□□□□ 0.77
PHGDHO43175 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PHGDHO43175 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PHGDHO43175 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHGDHO43175 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
PHGDHO43175 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PHGDHO43175 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PHGDHO43175 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PHGDHO43175 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PHGDHO43175 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHGDHO43175 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PHGDHO43175 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.84■□□□□ 0.77
PHGDHO43175 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.84■□□□□ 0.77
PHGDHO43175 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PHGDHO43175 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 MCRIP2P1-201ENST00000394346 511 ntBASIC19.84■□□□□ 0.77
PHGDHO43175 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.84■□□□□ 0.77
PHGDHO43175 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.84■□□□□ 0.77
PHGDHO43175 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.84■□□□□ 0.77
PHGDHO43175 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PHGDHO43175 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.84■□□□□ 0.77
PHGDHO43175 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHGDHO43175 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.84■□□□□ 0.77
PHGDHO43175 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHGDHO43175 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PHGDHO43175 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.83■□□□□ 0.77
PHGDHO43175 AC087289.5-201ENST00000586076 3175 ntBASIC19.83■□□□□ 0.77
PHGDHO43175 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.83■□□□□ 0.77
PHGDHO43175 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHGDHO43175 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PHGDHO43175 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.83■□□□□ 0.77
PHGDHO43175 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.83■□□□□ 0.77
PHGDHO43175 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHGDHO43175 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHGDHO43175 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.83■□□□□ 0.77
PHGDHO43175 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHGDHO43175 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.83■□□□□ 0.77
PHGDHO43175 AC006015.1-201ENST00000429970 570 ntBASIC19.83■□□□□ 0.77
PHGDHO43175 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PHGDHO43175 RARRES2P6-201ENST00000567333 442 ntBASIC19.83■□□□□ 0.77
PHGDHO43175 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.83■□□□□ 0.77
PHGDHO43175 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PHGDHO43175 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHGDHO43175 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHGDHO43175 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHGDHO43175 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHGDHO43175 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHGDHO43175 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PHGDHO43175 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PHGDHO43175 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.82■□□□□ 0.76
PHGDHO43175 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHGDHO43175 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms