Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 EEF1DP3-203ENST00000566025 782 ntBASIC18.91■□□□□ 0.62
CLOCKO15516 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 AC053503.5-201ENST00000601508 636 ntBASIC18.91■□□□□ 0.62
CLOCKO15516 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 TMEM179-206ENST00000616017 1645 ntBASIC18.91■□□□□ 0.62
CLOCKO15516 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CLOCKO15516 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CLOCKO15516 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLOCKO15516 AC026471.1-201ENST00000564629 3026 ntBASIC18.9■□□□□ 0.62
CLOCKO15516 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CLOCKO15516 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLOCKO15516 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.9■□□□□ 0.62
CLOCKO15516 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.9■□□□□ 0.62
CLOCKO15516 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLOCKO15516 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.9■□□□□ 0.62
CLOCKO15516 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.9■□□□□ 0.62
CLOCKO15516 TERF1P2-201ENST00000583350 1212 ntBASIC18.9■□□□□ 0.62
CLOCKO15516 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.9■□□□□ 0.62
CLOCKO15516 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLOCKO15516 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.9■□□□□ 0.62
CLOCKO15516 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLOCKO15516 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLOCKO15516 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CLOCKO15516 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
CLOCKO15516 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.89■□□□□ 0.62
CLOCKO15516 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLOCKO15516 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLOCKO15516 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLOCKO15516 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLOCKO15516 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLOCKO15516 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.89■□□□□ 0.61
CLOCKO15516 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.89■□□□□ 0.61
CLOCKO15516 MIR2861-201ENST00000636310 90 ntBASIC18.89■□□□□ 0.61
CLOCKO15516 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLOCKO15516 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.89■□□□□ 0.61
CLOCKO15516 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLOCKO15516 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms