Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.93■■□□□ 1.42
FOXN1O15353 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN1O15353 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.92■■□□□ 1.42
FOXN1O15353 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.92■■□□□ 1.42
FOXN1O15353 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
FOXN1O15353 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
FOXN1O15353 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.92■■□□□ 1.42
FOXN1O15353 AC022616.7-201ENST00000525383 220 ntBASIC23.92■■□□□ 1.42
FOXN1O15353 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.92■■□□□ 1.42
FOXN1O15353 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.92■■□□□ 1.42
FOXN1O15353 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.92■■□□□ 1.42
FOXN1O15353 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.92■■□□□ 1.42
FOXN1O15353 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
FOXN1O15353 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN1O15353 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
FOXN1O15353 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.91■■□□□ 1.42
FOXN1O15353 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.91■■□□□ 1.42
FOXN1O15353 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.91■■□□□ 1.42
FOXN1O15353 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.91■■□□□ 1.42
FOXN1O15353 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.91■■□□□ 1.42
FOXN1O15353 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.91■■□□□ 1.42
FOXN1O15353 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
FOXN1O15353 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.91■■□□□ 1.42
FOXN1O15353 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN1O15353 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
FOXN1O15353 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.9■■□□□ 1.42
FOXN1O15353 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.9■■□□□ 1.42
FOXN1O15353 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.9■■□□□ 1.42
FOXN1O15353 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
FOXN1O15353 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.9■■□□□ 1.42
FOXN1O15353 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.9■■□□□ 1.42
FOXN1O15353 AC027702.1-201ENST00000563810 1770 ntBASIC23.9■■□□□ 1.42
FOXN1O15353 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.9■■□□□ 1.42
FOXN1O15353 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN1O15353 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
FOXN1O15353 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
FOXN1O15353 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
FOXN1O15353 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.89■■□□□ 1.42
FOXN1O15353 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
FOXN1O15353 LIN28AP1-201ENST00000429574 405 ntBASIC23.89■■□□□ 1.41
FOXN1O15353 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.89■■□□□ 1.41
FOXN1O15353 FITM1-202ENST00000559294 800 ntBASIC23.89■■□□□ 1.41
FOXN1O15353 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
FOXN1O15353 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
FOXN1O15353 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
FOXN1O15353 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
FOXN1O15353 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.88■■□□□ 1.41
FOXN1O15353 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.88■■□□□ 1.41
FOXN1O15353 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXN1O15353 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 AC006538.3-201ENST00000612495 578 ntBASIC23.88■■□□□ 1.41
FOXN1O15353 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXN1O15353 AP000550.4-202ENST00000639755 178 ntBASIC23.88■■□□□ 1.41
FOXN1O15353 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
FOXN1O15353 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN1O15353 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.87■■□□□ 1.41
FOXN1O15353 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN1O15353 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXN1O15353 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN1O15353 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN1O15353 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN1O15353 AP000593.1-201ENST00000393668 712 ntBASIC23.87■■□□□ 1.41
FOXN1O15353 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.87■■□□□ 1.41
FOXN1O15353 AK4P3-201ENST00000418260 669 ntBASIC23.87■■□□□ 1.41
FOXN1O15353 AL353807.1-201ENST00000427475 662 ntBASIC23.87■■□□□ 1.41
FOXN1O15353 ATP5G1P1-201ENST00000448724 379 ntBASIC23.87■■□□□ 1.41
FOXN1O15353 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms