Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC28A1O00337 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 KRT8P17-201ENST00000453110 1448 ntBASIC19.25■□□□□ 0.67
SLC28A1O00337 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SLC28A1O00337 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 AL158211.5-201ENST00000623583 2518 ntBASIC19.24■□□□□ 0.67
SLC28A1O00337 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 DUX4L16-201ENST00000555130 1264 ntBASIC19.24■□□□□ 0.67
SLC28A1O00337 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC28A1O00337 PTBP1P-201ENST00000554374 1601 ntBASIC19.24■□□□□ 0.67
SLC28A1O00337 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 AC068338.2-201ENST00000563278 1430 ntBASIC19.24■□□□□ 0.67
SLC28A1O00337 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC28A1O00337 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC28A1O00337 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A1O00337 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC28A1O00337 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A1O00337 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SLC28A1O00337 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC28A1O00337 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC28A1O00337 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC28A1O00337 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A1O00337 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC28A1O00337 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC28A1O00337 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC28A1O00337 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A1O00337 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
SLC28A1O00337 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC28A1O00337 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC28A1O00337 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC28A1O00337 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 KRT18P68-201ENST00000392293 1000 ntBASIC19.22■□□□□ 0.67
SLC28A1O00337 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC28A1O00337 CNN2P6-201ENST00000439038 900 ntBASIC19.22■□□□□ 0.67
SLC28A1O00337 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.22■□□□□ 0.67
SLC28A1O00337 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC28A1O00337 AL031963.3-201ENST00000606441 850 ntBASIC19.22■□□□□ 0.67
SLC28A1O00337 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A1O00337 AC105020.6-201ENST00000621523 1217 ntBASIC19.22■□□□□ 0.67
SLC28A1O00337 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A1O00337 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC28A1O00337 KRT16P6-202ENST00000425692 1426 ntBASIC19.22■□□□□ 0.67
SLC28A1O00337 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC28A1O00337 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A1O00337 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC28A1O00337 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC28A1O00337 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC28A1O00337 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC28A1O00337 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC28A1O00337 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC28A1O00337 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC28A1O00337 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC28A1O00337 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SLC28A1O00337 AC009237.14-201ENST00000609975 1594 ntBASIC19.21■□□□□ 0.67
SLC28A1O00337 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC28A1O00337 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC28A1O00337 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A1O00337 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC28A1O00337 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 KRT8P20-201ENST00000423953 1409 ntBASIC19.2■□□□□ 0.66
SLC28A1O00337 AC116562.4-201ENST00000641316 2276 ntBASIC19.2■□□□□ 0.66
SLC28A1O00337 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC28A1O00337 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC28A1O00337 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC28A1O00337 AC069236.1-201ENST00000604339 616 ntBASIC19.2■□□□□ 0.66
SLC28A1O00337 AC011767.1-201ENST00000617410 1153 ntBASIC19.2■□□□□ 0.66
SLC28A1O00337 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A1O00337 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms