Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.96■□□□□ 0.63
UPK1AO00322 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.96■□□□□ 0.63
UPK1AO00322 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.96■□□□□ 0.63
UPK1AO00322 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.96■□□□□ 0.63
UPK1AO00322 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1AO00322 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UPK1AO00322 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
UPK1AO00322 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 AC008694.1-202ENST00000636953 945 ntBASIC18.95■□□□□ 0.62
UPK1AO00322 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1AO00322 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1AO00322 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UPK1AO00322 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK1AO00322 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UPK1AO00322 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK1AO00322 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.94■□□□□ 0.62
UPK1AO00322 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
UPK1AO00322 OR10C1-204ENST00000622521 1039 ntBASIC18.94■□□□□ 0.62
UPK1AO00322 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
UPK1AO00322 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UPK1AO00322 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1AO00322 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK1AO00322 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK1AO00322 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.93■□□□□ 0.62
UPK1AO00322 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.93■□□□□ 0.62
UPK1AO00322 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.93■□□□□ 0.62
UPK1AO00322 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 RAP2CP1-201ENST00000605103 478 ntBASIC18.93■□□□□ 0.62
UPK1AO00322 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1AO00322 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.92■□□□□ 0.62
UPK1AO00322 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 AC005332.7-201ENST00000614046 2005 ntBASIC18.92■□□□□ 0.62
UPK1AO00322 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.92■□□□□ 0.62
UPK1AO00322 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UPK1AO00322 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UPK1AO00322 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.92■□□□□ 0.62
UPK1AO00322 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.92■□□□□ 0.62
UPK1AO00322 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.92■□□□□ 0.62
UPK1AO00322 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1AO00322 AC010980.2-201ENST00000587099 1412 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.91■□□□□ 0.62
UPK1AO00322 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 AC004408.2-201ENST00000623613 2777 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms