Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.96■□□□□ 0.63
PDLIM1O00151 AL049812.1-201ENST00000432563 2267 ntBASIC18.96■□□□□ 0.63
PDLIM1O00151 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM1O00151 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM1O00151 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM1O00151 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM1O00151 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDLIM1O00151 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
PDLIM1O00151 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDLIM1O00151 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDLIM1O00151 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM1O00151 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDLIM1O00151 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.95■□□□□ 0.62
PDLIM1O00151 CCDC92B-201ENST00000575506 885 ntBASIC18.95■□□□□ 0.62
PDLIM1O00151 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDLIM1O00151 MIR5787-201ENST00000611784 55 ntBASIC18.95■□□□□ 0.62
PDLIM1O00151 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PDLIM1O00151 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.95■□□□□ 0.62
PDLIM1O00151 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
PDLIM1O00151 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM1O00151 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM1O00151 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM1O00151 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDLIM1O00151 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM1O00151 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM1O00151 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L2-201ENST00000561772 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.94■□□□□ 0.62
PDLIM1O00151 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L6-201ENST00000626483 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L1-201ENST00000627662 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L8-201ENST00000629013 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L3-201ENST00000630187 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L7-201ENST00000630678 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 DUX4L5-201ENST00000630834 1275 ntBASIC18.94■□□□□ 0.62
PDLIM1O00151 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PDLIM1O00151 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM1O00151 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM1O00151 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM1O00151 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM1O00151 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM1O00151 AC093484.2-201ENST00000580996 2166 ntBASIC18.93■□□□□ 0.62
PDLIM1O00151 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM1O00151 AC009237.3-201ENST00000393279 1427 ntBASIC18.93■□□□□ 0.62
PDLIM1O00151 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PDLIM1O00151 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM1O00151 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM1O00151 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM1O00151 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM1O00151 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM1O00151 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.93■□□□□ 0.62
PDLIM1O00151 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM1O00151 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM1O00151 AC055733.4-201ENST00000638462 1354 ntBASIC18.93■□□□□ 0.62
PDLIM1O00151 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM1O00151 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM1O00151 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM1O00151 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM1O00151 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM1O00151 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM1O00151 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM1O00151 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms