Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 GCSHP5-201ENST00000443090 522 ntBASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM200CA6NKL6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 KRT8P17-201ENST00000453110 1448 ntBASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 RPS2P52-201ENST00000469610 820 ntBASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 RN7SL471P-201ENST00000580476 299 ntBASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 AL031963.3-201ENST00000606441 850 ntBASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM200CA6NKL6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 KRT8P20-201ENST00000423953 1409 ntBASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 AC124283.5-201ENST00000624661 1809 ntBASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 MTDHP1-201ENST00000605323 784 ntBASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 SMG8-203ENST00000578922 2178 ntBASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 AC020907.5-201ENST00000624372 1936 ntBASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMEM200CA6NKL6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM200CA6NKL6 AP005212.1-201ENST00000581547 1997 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms