Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
TCRBV7S3A2A0A539 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV7S3A2A0A539 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV7S3A2A0A539 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.33■□□□□ 0.84
TCRBV7S3A2A0A539 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 AC093484.2-201ENST00000580996 2166 ntBASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 CYP2T1P-201ENST00000432607 1285 ntBASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.32■□□□□ 0.84
TCRBV7S3A2A0A539 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 KRT18P68-201ENST00000392293 1000 ntBASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV7S3A2A0A539 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 CYP2T3P-201ENST00000601990 817 ntBASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 AC005332.7-201ENST00000614046 2005 ntBASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
TCRBV7S3A2A0A539 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 AC098818.2-201ENST00000564925 2320 ntBASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 AL162430.1-201ENST00000480705 870 ntBASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV7S3A2A0A539 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 AL031963.3-201ENST00000606441 850 ntBASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms