Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00959A0A1B0GUT2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 CYP21A1P-202ENST00000354927 1481 ntBASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 KRT18P61-201ENST00000585825 1298 ntBASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00959A0A1B0GUT2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 AL162412.1-201ENST00000567129 965 ntBASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 NTF6G-201ENST00000591094 616 ntBASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00959A0A1B0GUT2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00959A0A1B0GUT2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00959A0A1B0GUT2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
LINC00959A0A1B0GUT2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00959A0A1B0GUT2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00959A0A1B0GUT2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00959A0A1B0GUT2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms