Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 EDA-201ENST00000338901 1233 ntBASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CDV3P1-201ENST00000471403 739 ntBASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AL356652.1-201ENST00000615962 565 ntBASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-1A0A0K0K1D8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC087633.2-202ENST00000565166 1439 ntBASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 IRS3P-201ENST00000223076 1006 ntBASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KRT16P6-202ENST00000425692 1426 ntBASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AP001160.3-201ENST00000601484 763 ntBASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KRT8P17-201ENST00000453110 1448 ntBASIC14.92□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms