Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-5A0A0J9YX44 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-5A0A0J9YX44 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRBV5-5A0A0J9YX44 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 KRT8P17-201ENST00000453110 1448 ntBASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 YBX1P1-201ENST00000445822 960 ntBASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-5A0A0J9YX44 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 AL032819.2-201ENST00000624543 2162 ntBASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-5A0A0J9YX44 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms