Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 BCL2-203ENST00000589955 5011 ntBASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 AC126544.1-201ENST00000580842 1059 ntBASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 AC005332.7-201ENST00000614046 2005 ntBASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRAV34A0A0B4J273 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 AC005082.1-201ENST00000413042 2259 ntBASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 BX842568.3-201ENST00000418104 571 ntBASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 GUSBP5-201ENST00000418136 578 ntBASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV34A0A0B4J273 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
TRAV34A0A0B4J273 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 PKD1P1-201ENST00000458669 6805 ntBASIC15.39■□□□□ 0.05
TRAV34A0A0B4J273 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms