Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 CNN2P6-201ENST00000439038 900 ntBASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 AC068338.2-201ENST00000563278 1430 ntBASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 AC007322.1-201ENST00000426983 750 ntBASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 CYP2T1P-201ENST00000432607 1285 ntBASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV4A0A0B4J268 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV4A0A0B4J268 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms