Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC090771.1-201ENST00000585803 1618 ntBASIC8.65□□□□□ -1.03
HMG20BQ9P0W2 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.65□□□□□ -1.03
HMG20BQ9P0W2 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
HMG20BQ9P0W2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 LINC02035-201ENST00000610128 5476 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC079777.1-201ENST00000623836 1953 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 OR2A3P-202ENST00000641249 1776 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 RNA5SP280-201ENST00000411230 115 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 OR52N3P-201ENST00000413417 934 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 GSTA6P-201ENST00000424144 582 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC245047.1-201ENST00000433276 873 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC009244.1-201ENST00000450566 258 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 OR13C1P-201ENST00000457612 963 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 RN7SL797P-201ENST00000486314 297 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC112225.1-201ENST00000508230 297 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC008868.1-201ENST00000509786 737 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 MIR4428-201ENST00000584884 73 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC068802.1-201ENST00000603420 732 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC008626.2-201ENST00000624425 248 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AC005355.2-201ENST00000625064 484 ntBASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HMG20BQ9P0W2 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AL512353.3-201ENST00000417517 1326 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 RN7SKP268-201ENST00000411107 316 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 RN7SL160P-201ENST00000468558 284 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 SCARNA11.1-201ENST00000516918 132 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 MIR3135A-201ENST00000578460 77 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 RN7SL32P-201ENST00000580514 281 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 MIR665-201ENST00000635949 72 ntBASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMG20BQ9P0W2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 AC079178.2-201ENST00000439323 1624 ntBASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMG20BQ9P0W2 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms