Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 SNORD94-201ENST00000386037 137 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 SNORA11.3-201ENST00000408471 128 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC245047.5-201ENST00000437312 556 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 PABPC1P1-201ENST00000506347 591 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC116917.1-201ENST00000520558 305 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 MIR378C-201ENST00000578683 81 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 SNORA11.6-201ENST00000619030 128 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AL035425.4-201ENST00000624509 1063 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 MIR665-201ENST00000635949 72 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 MKI67P1-201ENST00000604297 1460 ntBASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDK5RAP2Q96SN8 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AC004023.1-201ENST00000561473 1744 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 VIM2P-201ENST00000402383 1294 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AC099535.1-201ENST00000408928 371 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 RNU2-18P-201ENST00000411224 162 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AL034399.1-201ENST00000451535 380 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 RN7SL390P-201ENST00000470634 284 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 RN7SL267P-201ENST00000485107 261 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AP005329.3-201ENST00000609924 686 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 GAPDHP41-201ENST00000613707 975 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 MAPK10-383ENST00000642032 3390 ntBASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP2Q96SN8 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 LSM3P3-201ENST00000436601 306 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 RN7SL741P-201ENST00000482473 289 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC007255.2-201ENST00000604053 631 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AL162377.2-201ENST00000624532 337 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 OR52B5P-204ENST00000641744 3467 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC121334.1-201ENST00000396414 802 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 BX323845.2-201ENST00000458382 234 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 RPS26P11-201ENST00000463445 348 ntBASIC8.19□□□□□ -1.1
CDK5RAP2Q96SN8 RPS26P6-201ENST00000475156 348 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms