Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 AC018717.1-201ENST00000457712 1505 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 U3.7-201ENST00000363668 216 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 AC006511.2-201ENST00000388966 660 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 RN7SKP293-201ENST00000411389 296 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 AC006455.6-201ENST00000426192 893 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CST12P-201ENST00000457644 362 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 AC083806.1-201ENST00000468934 316 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 AC026254.2-201ENST00000475295 371 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 NDUFA5P12-201ENST00000503796 343 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CDH12P4-201ENST00000517835 295 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CDH12P3-201ENST00000517935 295 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CDH12P1-201ENST00000518435 295 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 SNORA74.4-201ENST00000607595 199 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 MAPK6PS6-201ENST00000420752 1053 ntBASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AL024493.1-201ENST00000449217 833 ntBASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 RN7SL787P-201ENST00000613000 284 ntBASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 AC015689.2-201ENST00000528172 1738 ntBASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
RIMBP3Q9UFD9 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 RNA5SP110-201ENST00000362638 115 ntBASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 RNU6-171P-201ENST00000384354 107 ntBASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 IGLV2-28-201ENST00000520681 304 ntBASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 AC004908.1-201ENST00000606572 541 ntBASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 5S_rRNA.28-201ENST00000638107 119 ntBASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 TNIK-214ENST00000488470 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 OR51E1-202ENST00000530215 2942 ntBASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RIMBP3Q9UFD9 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 SNORA56-201ENST00000383966 129 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC091685.2-201ENST00000454924 864 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 EDNRA-201ENST00000324300 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms