Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RN7SL519P-201ENST00000497925 288 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 FTH1P8-201ENST00000498161 514 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 MIR5192-201ENST00000579892 92 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 RN7SL760P-201ENST00000607344 270 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AC006335.3-201ENST00000613408 292 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 KARSP2-201ENST00000415696 1639 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AC090771.1-201ENST00000585803 1618 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC005034.3-201ENST00000604845 1747 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 RN7SKP211-201ENST00000363328 315 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 FDPSP1-201ENST00000424976 1071 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 CYP2C56P-201ENST00000440076 291 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 RN7SL549P-201ENST00000478997 282 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC146944.3-201ENST00000509969 371 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 OR4A1P-201ENST00000532342 920 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 RN7SL835P-201ENST00000579920 262 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC135050.6-202ENST00000613584 392 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 BX005195.1-201ENST00000618097 1198 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 uc_338.21-201ENST00000622458 147 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 SAMMSON-214ENST00000641395 1264 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 AC132219.2-201ENST00000624416 2327 ntBASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CCDC50Q8IVM0 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.59□□□□□ -1.2
CCDC50Q8IVM0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
CCDC50Q8IVM0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CCDC50Q8IVM0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 SNORA73B-201ENST00000363217 204 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 GSTA6P-201ENST00000424144 582 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 RPL6P2-201ENST00000425480 783 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 PRELID1P3-201ENST00000450055 643 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 RPL12P7-201ENST00000493832 494 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AC008967.1-201ENST00000504843 163 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AC044860.3-201ENST00000559957 368 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AL365223.1-201ENST00000574864 1297 ntBASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC50Q8IVM0 AC009955.2-201ENST00000597288 542 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms