Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 SNORA68-201ENST00000384437 133 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 RNU6-1055P-201ENST00000391085 107 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 RPL5P8-201ENST00000396820 815 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNED1Q8TER0 RNA5SP431-201ENST00000410312 120 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 EEF1B2P3-201ENST00000447718 678 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 RN7SL160P-201ENST00000468558 284 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC131233.1-201ENST00000479200 955 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC021146.11-201ENST00000503319 491 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 PGAM4P2-201ENST00000512491 721 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 IGKV2D-38-201ENST00000518423 240 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC079866.1-201ENST00000534985 1220 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC068802.1-201ENST00000603420 732 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 AC025162.2-201ENST00000619602 560 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 RAB28P4-201ENST00000622233 665 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 AL121936.2-201ENST00000641935 662 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNED1Q8TER0 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SNED1Q8TER0 CDY19P-201ENST00000411668 1613 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 CDY18P-201ENST00000438294 1609 ntBASIC8.58□□□□□ -1.04
SNED1Q8TER0 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SNED1Q8TER0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
SNED1Q8TER0 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 RNA5SP512-201ENST00000364550 120 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 RN7SKP240-201ENST00000410583 375 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 AKR1D1P1-201ENST00000457236 936 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 AP004609.2-201ENST00000532177 190 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 TOMM20P1-201ENST00000534518 427 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 AC007068.2-201ENST00000543168 395 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 DIMT1P1-201ENST00000603970 763 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 AC027559.1-201ENST00000636288 271 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 AC119674.1-201ENST00000641611 1210 ntBASIC8.57□□□□□ -1.04
SNED1Q8TER0 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SNED1Q8TER0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SNED1Q8TER0 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 OR52K3P-202ENST00000641797 1729 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 AC097359.1-201ENST00000447946 463 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.56□□□□□ -1.04
SNED1Q8TER0 AC096922.1-201ENST00000461635 651 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 RPL34P34-201ENST00000465389 354 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 RN7SL37P-201ENST00000490461 307 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 MIR4732-201ENST00000581873 76 ntBASIC8.56□□□□□ -1.04
SNED1Q8TER0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNED1Q8TER0 AL359742.1-201ENST00000622497 540 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms