Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC004852.1-201ENST00000605206 154 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AL096855.2-201ENST00000605785 369 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AL133406.3-201ENST00000606817 541 ntBASIC7.64□□□□□ -1.19
NEK3P51956 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 CASC19-212ENST00000641153 1287 ntBASIC7.64□□□□□ -1.19
NEK3P51956 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NEK3P51956 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.64□□□□□ -1.19
NEK3P51956 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.64□□□□□ -1.19
NEK3P51956 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.64□□□□□ -1.19
NEK3P51956 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 FOLH1B-202ENST00000529567 2145 ntBASIC7.64□□□□□ -1.19
NEK3P51956 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.64□□□□□ -1.19
NEK3P51956 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
NEK3P51956 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.63□□□□□ -1.19
NEK3P51956 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NEK3P51956 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 KYNUP1-201ENST00000466683 1406 ntBASIC7.63□□□□□ -1.19
NEK3P51956 TRIM60P14-201ENST00000513444 1419 ntBASIC7.63□□□□□ -1.19
NEK3P51956 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.63□□□□□ -1.19
NEK3P51956 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 PSMC1P7-201ENST00000495689 1315 ntBASIC7.63□□□□□ -1.19
NEK3P51956 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.63□□□□□ -1.19
NEK3P51956 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 SNORA70G-201ENST00000383923 142 ntBASIC7.63□□□□□ -1.19
NEK3P51956 RPL5P28-201ENST00000418634 693 ntBASIC7.63□□□□□ -1.19
NEK3P51956 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.63□□□□□ -1.19
NEK3P51956 ATP5LP4-201ENST00000434169 307 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.63□□□□□ -1.19
NEK3P51956 TAAR3P-201ENST00000466706 1078 ntBASIC7.63□□□□□ -1.19
NEK3P51956 RPL12P40-201ENST00000467028 488 ntBASIC7.63□□□□□ -1.19
NEK3P51956 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 TAAR3P-202ENST00000481759 1025 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 RNU6-1334P-201ENST00000516032 105 ntBASIC7.63□□□□□ -1.19
NEK3P51956 SNX18P27-201ENST00000523611 779 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.63□□□□□ -1.19
NEK3P51956 AL356800.1-201ENST00000553339 735 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AL049869.4-201ENST00000555669 178 ntBASIC7.63□□□□□ -1.19
NEK3P51956 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.63□□□□□ -1.19
NEK3P51956 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.63□□□□□ -1.19
NEK3P51956 AC044860.3-201ENST00000559957 368 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.63□□□□□ -1.19
NEK3P51956 AC009303.3-201ENST00000591103 736 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AC005229.3-201ENST00000603438 323 ntBASIC7.63□□□□□ -1.19
NEK3P51956 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.63□□□□□ -1.19
NEK3P51956 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NEK3P51956 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.63□□□□□ -1.19
NEK3P51956 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NEK3P51956 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.63□□□□□ -1.19
NEK3P51956 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NEK3P51956 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 AC087045.3-201ENST00000623046 2468 ntBASIC7.62□□□□□ -1.19
NEK3P51956 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 DDX50P1-201ENST00000438163 2400 ntBASIC7.62□□□□□ -1.19
NEK3P51956 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
NEK3P51956 AL357556.1-201ENST00000421884 1388 ntBASIC7.62□□□□□ -1.19
NEK3P51956 CASC19-255ENST00000641733 1385 ntBASIC7.62□□□□□ -1.19
NEK3P51956 AL353795.1-201ENST00000439134 1775 ntBASIC7.62□□□□□ -1.19
NEK3P51956 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
NEK3P51956 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NEK3P51956 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NEK3P51956 PTMAP8-201ENST00000397729 342 ntBASIC7.62□□□□□ -1.19
NEK3P51956 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 RN7SKP236-201ENST00000410635 284 ntBASIC7.62□□□□□ -1.19
NEK3P51956 SNX18P13-201ENST00000412442 529 ntBASIC7.62□□□□□ -1.19
NEK3P51956 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.62□□□□□ -1.19
NEK3P51956 SNX18P3-201ENST00000424993 835 ntBASIC7.62□□□□□ -1.19
NEK3P51956 TRBV8-1-201ENST00000481590 279 ntBASIC7.62□□□□□ -1.19
NEK3P51956 RN7SL516P-201ENST00000496127 297 ntBASIC7.62□□□□□ -1.19
NEK3P51956 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NEK3P51956 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
NEK3P51956 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.62□□□□□ -1.19
NEK3P51956 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms