Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC009220.2-201ENST00000489759 1751 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 FAM204BP-201ENST00000369171 701 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 RPL24P7-201ENST00000399435 453 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 RN7SKP254-201ENST00000410685 310 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL672212.1-201ENST00000422246 400 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 SNORA81.1-201ENST00000458922 177 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 RPS4XP17-201ENST00000479057 754 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 RN7SL797P-201ENST00000486314 297 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 RN7SL612P-201ENST00000497704 295 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AC069240.2-201ENST00000550242 609 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 RN7SL126P-201ENST00000616400 299 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL138693.1-201ENST00000622219 129 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AC119674.1-201ENST00000641611 1210 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL139254.2-202ENST00000641937 1156 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 AC026464.2-201ENST00000567834 2421 ntBASIC8.45□□□□□ -1.06
HLA-DOAP06340 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-DOAP06340 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-DOAP06340 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 RN7SKP118-201ENST00000364331 330 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 AL355375.1-201ENST00000405686 392 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 MYO5BP3-201ENST00000431872 1279 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 PSMD8P1-201ENST00000436275 769 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 VN1R6P-201ENST00000458417 907 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC137549.1-201ENST00000514243 533 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC021820.1-201ENST00000525564 808 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC079866.1-201ENST00000534985 1220 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC010287.1-201ENST00000566916 357 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 MIR4428-201ENST00000584884 73 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 AL049541.2-201ENST00000626377 555 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 AC061975.5-201ENST00000584928 1441 ntBASIC8.44□□□□□ -1.06
HLA-DOAP06340 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-DOAP06340 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.44□□□□□ -1.06
HLA-DOAP06340 KARSP2-201ENST00000415696 1639 ntBASIC8.43□□□□□ -1.06
HLA-DOAP06340 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.43□□□□□ -1.06
HLA-DOAP06340 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.43□□□□□ -1.06
HLA-DOAP06340 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.43□□□□□ -1.06
HLA-DOAP06340 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HLA-DOAP06340 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HLA-DOAP06340 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
HLA-DOAP06340 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms