Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GOT2P1-201ENST00000440922 1309 ntBASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 AC020904.2-202ENST00000614660 1401 ntBASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 AC106754.1-201ENST00000562632 1513 ntBASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 AF131215.2-201ENST00000531549 1710 ntBASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 XRCC6P2-201ENST00000457831 1822 ntBASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
TRIM48Q8IWZ4 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 RNU1-16P-201ENST00000365477 164 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 SSX9-201ENST00000376909 591 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL139327.1-201ENST00000382988 348 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL139039.2-201ENST00000407436 479 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC073464.3-201ENST00000422564 712 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL512882.1-201ENST00000436086 832 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL606490.8-201ENST00000441624 319 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 RN7SL282P-201ENST00000479676 297 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 RN7SL635P-201ENST00000492123 296 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC082651.2-201ENST00000496833 166 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL158068.1-201ENST00000506116 616 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC106774.2-201ENST00000510266 406 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC097460.2-201ENST00000511857 741 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 OR7E2P-201ENST00000533071 889 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC139103.1-201ENST00000534696 1030 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC093510.2-201ENST00000562820 896 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 VN1R87P-201ENST00000596706 487 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AL161729.2-201ENST00000605700 456 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC069499.2-201ENST00000610665 382 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC104237.3-201ENST00000611809 427 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AC004943.1-203ENST00000624370 1074 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 GUCY2GP-201ENST00000479705 3222 ntBASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM48Q8IWZ4 MAPK10-290ENST00000641237 2826 ntBASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 AC079777.1-201ENST00000623836 1953 ntBASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 OR4K17-201ENST00000315543 1032 ntBASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM48Q8IWZ4 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms