Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC9.1□□□□□ -0.95
COL15A1P39059 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC9.1□□□□□ -0.95
COL15A1P39059 AP003033.2-201ENST00000528901 805 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC9.1□□□□□ -0.95
COL15A1P39059 MIR3157-201ENST00000578688 85 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC9.1□□□□□ -0.95
COL15A1P39059 AC009955.2-201ENST00000597288 542 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 AL139254.2-202ENST00000641937 1156 ntBASIC9.1□□□□□ -0.95
COL15A1P39059 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
COL15A1P39059 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.1□□□□□ -0.95
COL15A1P39059 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC9.09□□□□□ -0.95
COL15A1P39059 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
COL15A1P39059 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC9.09□□□□□ -0.95
COL15A1P39059 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
COL15A1P39059 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC9.09□□□□□ -0.95
COL15A1P39059 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC9.09□□□□□ -0.95
COL15A1P39059 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC9.09□□□□□ -0.95
COL15A1P39059 PIP5K1P2-201ENST00000437005 1120 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC9.09□□□□□ -0.95
COL15A1P39059 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC9.09□□□□□ -0.95
COL15A1P39059 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC9.09□□□□□ -0.95
COL15A1P39059 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC9.09□□□□□ -0.95
COL15A1P39059 BX323845.2-201ENST00000458382 234 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 AC026336.1-201ENST00000466577 351 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 RPS3AP49-201ENST00000472161 790 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 AC008967.1-201ENST00000504843 163 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 AP005597.2-201ENST00000526238 341 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC9.09□□□□□ -0.95
COL15A1P39059 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 PPIAP14-201ENST00000577627 496 ntBASIC9.09□□□□□ -0.95
COL15A1P39059 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
COL15A1P39059 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
COL15A1P39059 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
COL15A1P39059 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
COL15A1P39059 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
COL15A1P39059 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 OR52K3P-202ENST00000641797 1729 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 NACA-216ENST00000550952 2922 ntTSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC9.08□□□□□ -0.96
COL15A1P39059 CHCHD3P1-201ENST00000425516 676 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC9.08□□□□□ -0.96
COL15A1P39059 AC019084.1-201ENST00000457337 432 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 RN7SKP198-201ENST00000459286 306 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 RN7SL143P-201ENST00000496780 297 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 RN7SKP64-201ENST00000517206 328 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 AC116917.1-201ENST00000520558 305 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 AP001000.1-201ENST00000526843 742 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 AC023310.2-201ENST00000553844 547 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 OR4C49P-201ENST00000563891 900 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 AC137695.2-201ENST00000603123 754 ntBASIC9.08□□□□□ -0.96
COL15A1P39059 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC9.08□□□□□ -0.96
COL15A1P39059 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
COL15A1P39059 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC9.08□□□□□ -0.96
COL15A1P39059 AL359263.1-201ENST00000441188 2796 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms