Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
CPS1P31327 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.81
CPS1P31327 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
CPS1P31327 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CPS1P31327 THAP12P6-201ENST00000431978 2310 ntBASIC10.02□□□□□ -0.81
CPS1P31327 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC10.02□□□□□ -0.81
CPS1P31327 MTCO1P11-201ENST00000429111 1528 ntBASIC10.02□□□□□ -0.81
CPS1P31327 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 PPIAP22-201ENST00000358455 498 ntBASIC10.02□□□□□ -0.81
CPS1P31327 RNA5SP472-201ENST00000363868 119 ntBASIC10.02□□□□□ -0.81
CPS1P31327 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CPS1P31327 RPL12P23-201ENST00000405880 490 ntBASIC10.02□□□□□ -0.81
CPS1P31327 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC10.02□□□□□ -0.81
CPS1P31327 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC10.02□□□□□ -0.81
CPS1P31327 OR51P1P-201ENST00000447547 942 ntBASIC10.02□□□□□ -0.81
CPS1P31327 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
CPS1P31327 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC10.02□□□□□ -0.81
CPS1P31327 SNORA26.10-201ENST00000516427 141 ntBASIC10.02□□□□□ -0.81
CPS1P31327 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC10.02□□□□□ -0.81
CPS1P31327 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC10.02□□□□□ -0.81
CPS1P31327 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC10.02□□□□□ -0.81
CPS1P31327 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC10.02□□□□□ -0.81
CPS1P31327 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC10.02□□□□□ -0.81
CPS1P31327 SMIM12P1-201ENST00000603004 274 ntBASIC10.02□□□□□ -0.81
CPS1P31327 AC012175.1-201ENST00000603755 531 ntBASIC10.02□□□□□ -0.81
CPS1P31327 AC005514.1-201ENST00000623521 208 ntBASIC10.02□□□□□ -0.81
CPS1P31327 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CPS1P31327 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC10.02□□□□□ -0.81
CPS1P31327 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 AL049776.1-201ENST00000624600 2025 ntBASIC10.01□□□□□ -0.81
CPS1P31327 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CPS1P31327 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC10.01□□□□□ -0.81
CPS1P31327 BMS1P13-201ENST00000417301 885 ntBASIC10.01□□□□□ -0.81
CPS1P31327 VN1R53P-201ENST00000429536 957 ntBASIC10.01□□□□□ -0.81
CPS1P31327 BMS1P10-201ENST00000443754 1120 ntBASIC10.01□□□□□ -0.81
CPS1P31327 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC10.01□□□□□ -0.81
CPS1P31327 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 PTMAP1-205ENST00000455552 325 ntBASIC10.01□□□□□ -0.81
CPS1P31327 AC026336.1-201ENST00000466577 351 ntBASIC10.01□□□□□ -0.81
CPS1P31327 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC10.01□□□□□ -0.81
CPS1P31327 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC10.01□□□□□ -0.81
CPS1P31327 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC10.01□□□□□ -0.81
CPS1P31327 AC063977.7-201ENST00000594454 337 ntBASIC10.01□□□□□ -0.81
CPS1P31327 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC10.01□□□□□ -0.81
CPS1P31327 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC10.01□□□□□ -0.81
CPS1P31327 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC10.01□□□□□ -0.81
CPS1P31327 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CPS1P31327 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC10□□□□□ -0.81
CPS1P31327 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
CPS1P31327 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
CPS1P31327 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 R3HDM2P1-201ENST00000505381 1960 ntBASIC10□□□□□ -0.81
CPS1P31327 AC010132.4-201ENST00000569883 1368 ntBASIC10□□□□□ -0.81
CPS1P31327 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CPS1P31327 SNORA77.2-201ENST00000408571 112 ntBASIC10□□□□□ -0.81
CPS1P31327 RPL34P19-201ENST00000415903 342 ntBASIC10□□□□□ -0.81
CPS1P31327 RPL12P12-201ENST00000424633 501 ntBASIC10□□□□□ -0.81
CPS1P31327 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC10□□□□□ -0.81
CPS1P31327 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC10□□□□□ -0.81
CPS1P31327 RN7SL797P-201ENST00000486314 297 ntBASIC10□□□□□ -0.81
CPS1P31327 AC117500.1-201ENST00000497352 755 ntBASIC10□□□□□ -0.81
CPS1P31327 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC10□□□□□ -0.81
CPS1P31327 MTCYBP44-201ENST00000514835 823 ntBASIC10□□□□□ -0.81
CPS1P31327 SNORA74.1-201ENST00000516320 180 ntBASIC10□□□□□ -0.81
CPS1P31327 RNA5SP441-201ENST00000516809 88 ntBASIC10□□□□□ -0.81
CPS1P31327 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC10□□□□□ -0.81
CPS1P31327 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC10□□□□□ -0.81
CPS1P31327 AC090022.1-201ENST00000546569 311 ntBASIC10□□□□□ -0.81
CPS1P31327 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms